Cow genome map
| Conread name: | Thy1-THY010019C10 |
| Conread position: | 1-333 |
| Cow position: | chr21:13313687-13314024 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 111, 157 |
| Conread position: | 1-383 |
| Cow position: | chr21:5018039-5018435 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-471 |
| Cow position: | chr21:4184828-4185327 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 286 |
| Conread position: | 1-564 |
| Cow position: | chr21:3779692-3780295 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 93 |
| Conread position: | 2-563 |
| Cow position: | chr21:35144687-35145273 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 29 |
| Conread position: | 8-471 |
| Cow position: | chr21:39425998-39426468 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 109 |
| Conread position: | 8-563 |
| Cow position: | chr21:2511777-2512369 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 36 |
| Conread position: | 8-563 |
| Cow position: | chr21:37372172-37372756 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 296 |
| Conread position: | 9-467 |
| Cow position: | chr21:1689229-1688750 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 35 |
| Conread position: | 18-228 |
| Cow position: | chr21:11452712-11452492 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 18-314 |
| Cow position: | chr21:46916620-46916925 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 81, 266 |
| Conread position: | 18-373 |
| Cow position: | chr21:10567622-10567978 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 18-465 |
| Cow position: | chr21:26402543-26402087 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 284 |
| Conread position: | 18-465 |
| Cow position: | chr21:28256378-28256826 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 198 |
| Conread position: | 18-483 |
| Cow position: | chr21:12055057-12054595 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 22 |
| Conread position: | 18-562 |
| Cow position: | chr21:1287273-1286693 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 393 |
| Conread position: | 18-565 |
| Cow position: | chr21:146874-147451 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 334 |
| Conread position: | 18-565 |
| Cow position: | chr21:5840319-5839738 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 249 |
| Conread position: | 18-582 |
| Cow position: | chr21:10851025-10851616 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 160 |
| Conread position: | 18-582 |
| Cow position: | chr21:31515383-31514775 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 583 |
| Conread position: | 18-584 |
| Cow position: | chr21:40270727-40270130 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 413 |
| Conread position: | 19-471 |
| Cow position: | chr21:1192706-1193162 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 245 |
| Conread position: | 34-563 |
| Cow position: | chr21:11506558-11507134 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 301 |
| Conread position: | 50-261 |
| Cow position: | chr21:21222991-21222772 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 55, 119 |
| Conread position: | 100-471 |
| Cow position: | chr21:26835926-26836303 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 141 |
| Conread position: | 284-554 |
| Cow position: | chr21:28613567-28613837 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 53, 103 |
| Conread position: | 325-563 |
| Cow position: | chr21:29004254-29004012 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 48 |
Show alignments to all cow chromosomes.