Cow genome map

Conread name: Thy1-THY010019C10

Conread position: 1-471
Cow position: chr22:11032503-11032987 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 43

Conread position: 1-562
Cow position: chr22:6502387-6501788 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 165

Conread position: 1-582
Cow position: chr22:1322968-1323575 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 199

Conread position: 2-336
Cow position: chr22:37072332-37071982 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 23, 0

Conread position: 2-347
Cow position: chr22:31314099-31314454 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 17, 269

Conread position: 2-563
Cow position: chr22:17327702-17327109 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 190

Conread position: 2-564
Cow position: chr22:44397200-44397781 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 267

Conread position: 2-565
Cow position: chr22:12730929-12730343 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 257

Conread position: 5-477
Cow position: chr22:2395239-2394746 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 332
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 20, 173

Conread position: 7-563
Cow position: chr22:1879555-1880153 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 285

Conread position: 8-471
Cow position: chr22:537863-538340 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 85

Conread position: 11-588
Cow position: chr22:23943375-23942786 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 363
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 89, 196

Conread position: 18-207
Cow position: chr22:27284799-27284997 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 18-228
Cow position: chr22:35671582-35671363 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 18-249
Cow position: chr22:6142610-6142375 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 135

Conread position: 18-281
Cow position: chr22:14630191-14630464 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 82, 247

Conread position: 18-347
Cow position: chr22:24950870-24951221 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 242
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 81, 316

Conread position: 18-356
Cow position: chr22:36551466-36551129 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 233
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 147, 19

Conread position: 18-433
Cow position: chr22:15313179-15312752 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 361

Conread position: 18-465
Cow position: chr22:19142917-19142462 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 207

Conread position: 18-465
Cow position: chr22:21590110-21590565 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 373

Conread position: 18-471
Cow position: chr22:1520247-1519783 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 74

Conread position: 18-471
Cow position: chr22:11804284-11803817 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 308

Conread position: 18-471
Cow position: chr22:20240070-20239605 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 18-554
Cow position: chr22:1281958-1281393 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 22

Conread position: 18-558
Cow position: chr22:44491806-44492400 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 395
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 84, 180

Conread position: 18-563
Cow position: chr22:694394-694965 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 221

Conread position: 18-563
Cow position: chr22:10909064-10908487 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 307

Conread position: 18-563
Cow position: chr22:37292897-37292325 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 377

Conread position: 18-563
Cow position: chr22:42991952-42992525 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 144

Conread position: 18-565
Cow position: chr22:36860757-36860183 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 54

Conread position: 18-582
Cow position: chr22:31334262-31333676 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 247

Conread position: 18-582
Cow position: chr22:34169111-34169708 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 572

Conread position: 18-590
Cow position: chr22:27309003-27308399 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 245

Conread position: 18-596
Cow position: chr22:6021435-6022050 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 306

Conread position: 18-596
Cow position: chr22:18028054-18028674 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 311

Conread position: 23-478
Cow position: chr22:45930451-45930912 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 306
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 82, 147

Conread position: 29-563
Cow position: chr22:18815597-18815016 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 575

Conread position: 34-596
Cow position: chr22:16201715-16202299 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 299

Conread position: 86-383
Cow position: chr22:3763484-3763198 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 190
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 128-591
Cow position: chr22:6602317-6601858 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 327
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 209, 85

Conread position: 192-568
Cow position: chr22:96388-96006 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 123

Conread position: 251-552
Cow position: chr22:284057-283746 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 287

Conread position: 327-553
Cow position: chr22:19585872-19585650 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 130

Conread position: 337-563
Cow position: chr22:33351782-33352021 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 146, 109

Show alignments to all cow chromosomes.