Cow genome map


           Conread name:
           Thy1-THY010019C10
        

               Conread position:
               1-261
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 59
               

               Conread position:
               2-562
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 396
               

               Conread position:
               2-563
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 592
               

               Conread position:
               2-563
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 583
               

               Conread position:
               5-208
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               5-554
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 307
               

               Conread position:
               13-563
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 253
               

               Conread position:
               14-554
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 151
               

               Conread position:
               16-465
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 220
               

               Conread position:
               18-228
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               18-376
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               252
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               83, 349
               

               Conread position:
               18-415
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 211
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 169
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 207
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 266
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 310
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 19
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 122
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               322
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               81, 255
               

               Conread position:
               18-482
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 315
               

               Conread position:
               18-482
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 310
               

               Conread position:
               18-493
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 61
               

               Conread position:
               18-554
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 249
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 312
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 204
               

               Conread position:
               18-582
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 567
               

               Conread position:
               18-586
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               19-471
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 248
               

               Conread position:
               20-471
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 20
               

               Conread position:
               20-476
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 269
               

               Conread position:
               20-563
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 373
               

               Conread position:
               23-558
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 318
               

               Conread position:
               23-582
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 110
               

               Conread position:
               34-228
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               65, 179
               

               Conread position:
               34-314
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               65, 248
               

               Conread position:
               49-477
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 152
               
Show alignments to all cow chromosomes.