Cow genome map
| Conread name: | Thy1-THY010019C10 |
| Conread position: | 1-261 |
| Cow position: | chr29:41366922-41366653 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-471 |
| Cow position: | chr29:32891561-32892038 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 59 |
| Conread position: | 2-562 |
| Cow position: | chr29:39078941-39078354 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 396 |
| Conread position: | 2-563 |
| Cow position: | chr29:19622517-19621919 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 592 |
| Conread position: | 2-563 |
| Cow position: | chr29:20251929-20252518 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 583 |
| Conread position: | 5-208 |
| Cow position: | chr29:14216736-14216949 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 5-554 |
| Cow position: | chr29:9642994-9642437 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 307 |
| Conread position: | 13-563 |
| Cow position: | chr29:19654409-19654986 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 253 |
| Conread position: | 14-554 |
| Cow position: | chr29:21426244-21425664 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 151 |
| Conread position: | 16-465 |
| Cow position: | chr29:45205285-45205741 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 220 |
| Conread position: | 18-228 |
| Cow position: | chr29:34926262-34926481 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 18-376 |
| Cow position: | chr29:2840593-2840224 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 252 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 83, 349 |
| Conread position: | 18-415 |
| Cow position: | chr29:6265490-6265074 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 18-465 |
| Cow position: | chr29:646581-647031 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 211 |
| Conread position: | 18-465 |
| Cow position: | chr29:7430434-7429976 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 18-465 |
| Cow position: | chr29:31096597-31096140 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 169 |
| Conread position: | 18-465 |
| Cow position: | chr29:31182188-31182646 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 207 |
| Conread position: | 18-471 |
| Cow position: | chr29:669274-668822 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 266 |
| Conread position: | 18-471 |
| Cow position: | chr29:7845166-7845635 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 310 |
| Conread position: | 18-471 |
| Cow position: | chr29:16111163-16111634 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 19 |
| Conread position: | 18-471 |
| Cow position: | chr29:32286985-32287428 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 18-471 |
| Cow position: | chr29:32558970-32558508 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 322 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 81, 255 |
| Conread position: | 18-482 |
| Cow position: | chr29:19885851-19886336 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 315 |
| Conread position: | 18-482 |
| Cow position: | chr29:43323344-43323820 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 310 |
| Conread position: | 18-493 |
| Cow position: | chr29:34799020-34798535 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 18-554 |
| Cow position: | chr29:32804223-32804763 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 18-563 |
| Cow position: | chr29:32540879-32541459 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 249 |
| Conread position: | 18-563 |
| Cow position: | chr29:40502193-40501640 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 312 |
| Conread position: | 18-565 |
| Cow position: | chr29:26164042-26163473 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 204 |
| Conread position: | 18-582 |
| Cow position: | chr29:38227763-38228355 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 567 |
| Conread position: | 18-586 |
| Cow position: | chr29:9620207-9620781 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 33 |
| Conread position: | 19-471 |
| Cow position: | chr29:14210783-14210323 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 248 |
| Conread position: | 20-471 |
| Cow position: | chr29:8664303-8664756 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 20-476 |
| Cow position: | chr29:35297618-35298069 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 269 |
| Conread position: | 20-563 |
| Cow position: | chr29:14586707-14587277 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 373 |
| Conread position: | 23-558 |
| Cow position: | chr29:14085336-14084775 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 318 |
| Conread position: | 23-582 |
| Cow position: | chr29:2100638-2101216 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 110 |
| Conread position: | 34-228 |
| Cow position: | chr29:38208269-38208067 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 179 |
| Conread position: | 34-314 |
| Cow position: | chr29:15968061-15967773 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 65, 248 |
| Conread position: | 49-477 |
| Cow position: | chr29:2949530-2949106 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 152 |
Show alignments to all cow chromosomes.