Cow genome map


           Conread name:
           Thy1-THY010019C10
        

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 223
               

               Conread position:
               1-477
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 202
               

               Conread position:
               2-541
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               2-562
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 45
               

               Conread position:
               4-393
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               267
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               95, 131
               

               Conread position:
               4-590
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 191
               

               Conread position:
               5-465
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 284
               

               Conread position:
               7-471
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 317
               

               Conread position:
               7-596
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               8-465
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 319
               

               Conread position:
               8-562
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 193
               

               Conread position:
               8-596
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 315
               

               Conread position:
               12-478
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 30
               

               Conread position:
               13-345
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               18-215
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-215
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               18-243
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               100, 202
               

               Conread position:
               18-270
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               83, 123
               

               Conread position:
               18-277
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               18-292
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               18-295
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 23
               

               Conread position:
               18-347
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               18-350
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 311
               

               Conread position:
               18-383
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 314
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 305
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 32
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 22
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 305
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 305
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 378
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 305
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 164
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 193
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 146
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 249
               

               Conread position:
               18-477
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 219
               

               Conread position:
               18-558
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 278
               

               Conread position:
               18-558
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 263
               

               Conread position:
               18-558
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 305
               

               Conread position:
               18-558
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 22
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 191
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 538
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 201
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 232
               

               Conread position:
               18-580
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-582
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 576
               

               Conread position:
               18-590
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 326
               

               Conread position:
               18-590
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               18-591
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 280
               

               Conread position:
               19-216
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               19-471
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               19-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 174
               

               Conread position:
               19-554
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               20-228
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               79, 20
               

               Conread position:
               20-563
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 303
               

               Conread position:
               23-264
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               32-471
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 7
               

               Conread position:
               111-558
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               353, 131
               

               Conread position:
               132-562
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 71
               

               Conread position:
               250-596
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               7, 24
               

               Conread position:
               303-554
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               31, 108
               

               Conread position:
               324-554
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               120, 215
               
Show alignments to all cow chromosomes.