Cow genome map
| Conread name: | Thy1-THY010019C10 |
| Conread position: | 1-348 |
| Cow position: | chr4:47254441-47254086 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 39 |
| Conread position: | 1-562 |
| Cow position: | chr4:28832045-28832628 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 337 |
| Conread position: | 2-338 |
| Cow position: | chr4:31669762-31670121 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-471 |
| Cow position: | chr4:12587821-12588299 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 216 |
| Conread position: | 2-471 |
| Cow position: | chr4:60263676-60263192 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 214 |
| Conread position: | 2-567 |
| Cow position: | chr4:43319156-43318553 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 591 |
| Conread position: | 5-471 |
| Cow position: | chr4:27334206-27334678 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 388 |
| Conread position: | 6-563 |
| Cow position: | chr4:45298593-45298020 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 147 |
| Conread position: | 8-461 |
| Cow position: | chr4:16057175-16057638 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 82 |
| Conread position: | 8-471 |
| Cow position: | chr4:17093370-17092897 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 160 |
| Conread position: | 8-471 |
| Cow position: | chr4:44780729-44780257 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 259 |
| Conread position: | 9-471 |
| Cow position: | chr4:5880659-5881124 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 106 |
| Conread position: | 11-596 |
| Cow position: | chr4:159657-160273 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 314 |
| Conread position: | 18-225 |
| Cow position: | chr4:29531373-29531162 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 85, 51 |
| Conread position: | 18-469 |
| Cow position: | chr4:6489857-6489397 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 272 |
| Conread position: | 18-471 |
| Cow position: | chr4:603521-603982 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 258 |
| Conread position: | 18-471 |
| Cow position: | chr4:5444330-5443864 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 307 |
| Conread position: | 18-471 |
| Cow position: | chr4:18424019-18423555 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 176 |
| Conread position: | 18-471 |
| Cow position: | chr4:31564797-31564336 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 22 |
| Conread position: | 18-477 |
| Cow position: | chr4:6206102-6206579 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 49 |
| Conread position: | 18-488 |
| Cow position: | chr4:18337369-18337836 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 306 |
| Conread position: | 18-493 |
| Cow position: | chr4:33596048-33596508 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 52 |
| Conread position: | 18-563 |
| Cow position: | chr4:356416-356985 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 162 |
| Conread position: | 18-563 |
| Cow position: | chr4:3126298-3126887 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 161 |
| Conread position: | 18-563 |
| Cow position: | chr4:33072314-33071744 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 314 |
| Conread position: | 18-563 |
| Cow position: | chr4:36896879-36897457 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 313 |
| Conread position: | 18-563 |
| Cow position: | chr4:43881612-43882187 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 249 |
| Conread position: | 18-563 |
| Cow position: | chr4:57984488-57985069 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 267 |
| Conread position: | 18-565 |
| Cow position: | chr4:16639117-16639694 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 568 |
| Conread position: | 18-565 |
| Cow position: | chr4:17925454-17924881 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 26 |
| Conread position: | 18-582 |
| Cow position: | chr4:13493825-13494426 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 576 |
| Conread position: | 18-589 |
| Cow position: | chr4:4416577-4417168 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 218 |
| Conread position: | 18-589 |
| Cow position: | chr4:44726103-44726694 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 322 |
| Conread position: | 18-591 |
| Cow position: | chr4:529905-530513 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 308 |
| Conread position: | 19-333 |
| Cow position: | chr4:48026910-48027239 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 86, 316 |
| Conread position: | 19-471 |
| Cow position: | chr4:16360419-16360883 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 274 |
| Conread position: | 20-563 |
| Cow position: | chr4:67681700-67682274 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 247 |
| Conread position: | 20-589 |
| Cow position: | chr4:12240701-12240108 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 30 |
| Conread position: | 54-432 |
| Cow position: | chr4:54152962-54152586 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 148 |
| Conread position: | 73-304 |
| Cow position: | chr4:29583644-29583409 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 190 |
| Conread position: | 290-554 |
| Cow position: | chr4:19005526-19005244 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 103 |
Show alignments to all cow chromosomes.