Cow genome map


           Conread name:
           Thy1-THY010019C10
        

               Conread position:
               1-554
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 138
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               23, 133
               

               Conread position:
               2-564
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 588
               

               Conread position:
               2-568
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               2-574
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 405
               

               Conread position:
               8-471
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 84
               

               Conread position:
               8-471
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 32
               

               Conread position:
               8-596
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 306
               

               Conread position:
               10-554
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 27
               

               Conread position:
               12-465
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               14-554
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 66
               

               Conread position:
               18-210
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-211
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               82, 186
               

               Conread position:
               18-228
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 135
               

               Conread position:
               18-261
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               84, 220
               

               Conread position:
               18-378
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               17, 194
               

               Conread position:
               18-426
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 139
               

               Conread position:
               18-464
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 156
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 183
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 146
               

               Conread position:
               18-470
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               315
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               81, 318
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 220
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 243
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 186
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 381
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 247
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 126
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 23
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 306
               

               Conread position:
               18-472
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 112
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 371
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 60
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 22
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 376
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 175
               

               Conread position:
               18-567
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 52
               

               Conread position:
               18-572
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 531
               

               Conread position:
               18-574
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 51
               

               Conread position:
               18-590
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 311
               

               Conread position:
               18-590
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 249
               

               Conread position:
               18-596
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 318
               

               Conread position:
               19-257
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               27, 21
               

               Conread position:
               19-318
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               91, 33
               

               Conread position:
               19-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 304
               

               Conread position:
               19-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 304
               

               Conread position:
               20-465
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 139
               

               Conread position:
               24-310
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               86, 225
               

               Conread position:
               27-551
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               32-563
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 403
               

               Conread position:
               49-471
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               109-554
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               362, 62
               

               Conread position:
               343-595
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               113, 132
               
Show alignments to all cow chromosomes.