Cow genome map


           Conread name:
           Thy1-THY010019C10
        

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               326
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               110, 72
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 8
               

               Conread position:
               2-481
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 236
               

               Conread position:
               2-558
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 528
               

               Conread position:
               5-228
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               7-471
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 157
               

               Conread position:
               8-471
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 32
               

               Conread position:
               8-599
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 32
               

               Conread position:
               12-415
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               18-257
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               81, 60
               

               Conread position:
               18-267
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               18-268
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               18-305
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               94, 140
               

               Conread position:
               18-418
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               18-464
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 263
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 197
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 165
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 94
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 270
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 29
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 311
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 311
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 366
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 123
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 308
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 253
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 162
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 252
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 180
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 309
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 290
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 231
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 305
               

               Conread position:
               18-476
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 371
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 180
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 277
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 412
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 577
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 320
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 311
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 272
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 115
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 251
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 232
               

               Conread position:
               18-588
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 162
               

               Conread position:
               19-465
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 22
               

               Conread position:
               19-563
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 300
               

               Conread position:
               19-568
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 28
               

               Conread position:
               20-563
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 569
               

               Conread position:
               20-565
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 129
               

               Conread position:
               23-568
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 211
               

               Conread position:
               32-596
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 8
               

               Conread position:
               38-255
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               46-596
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               111-598
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 85
               

               Conread position:
               123-548
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               198, 132
               

               Conread position:
               385-557
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               82, 39
               
Show alignments to all cow chromosomes.