Cow genome map
| Conread name: | Thy1-THY010019C10 |
| Conread position: | 1-440 |
| Cow position: | chr7:54643679-54643227 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 325 |
| Conread position: | 2-471 |
| Cow position: | chr7:3156277-3156765 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 274 |
| Conread position: | 2-471 |
| Cow position: | chr7:27348858-27348386 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 7-471 |
| Cow position: | chr7:3300334-3299872 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 206 |
| Conread position: | 8-256 |
| Cow position: | chr7:7257997-7258253 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 157 |
| Conread position: | 8-567 |
| Cow position: | chr7:20798620-20798029 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 196 |
| Conread position: | 11-461 |
| Cow position: | chr7:545669-546131 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 321 |
| Conread position: | 11-471 |
| Cow position: | chr7:20774506-20774037 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 235 |
| Conread position: | 11-484 |
| Cow position: | chr7:27583892-27583414 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 112 |
| Conread position: | 12-562 |
| Cow position: | chr7:29369199-29368620 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 273 |
| Conread position: | 18-246 |
| Cow position: | chr7:21311271-21311491 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 18-263 |
| Cow position: | chr7:49604584-49604840 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 18-281 |
| Cow position: | chr7:6580021-6580295 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 18-356 |
| Cow position: | chr7:61578288-61578644 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 18-403 |
| Cow position: | chr7:68481387-68481774 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 85, 124 |
| Conread position: | 18-463 |
| Cow position: | chr7:39792603-39793058 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 18-465 |
| Cow position: | chr7:16040-15584 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 5 |
| Conread position: | 18-465 |
| Cow position: | chr7:63386560-63387025 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 18-465 |
| Cow position: | chr7:64240176-64239713 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 202 |
| Conread position: | 18-471 |
| Cow position: | chr7:14138763-14138298 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 18-471 |
| Cow position: | chr7:20514943-20514489 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 305 |
| Conread position: | 18-471 |
| Cow position: | chr7:33332399-33332858 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 22 |
| Conread position: | 18-471 |
| Cow position: | chr7:59679681-59680147 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 18-481 |
| Cow position: | chr7:65458355-65457880 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 409 |
| Conread position: | 18-549 |
| Cow position: | chr7:21852998-21852427 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 143 |
| Conread position: | 18-554 |
| Cow position: | chr7:29471292-29471866 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 18-558 |
| Cow position: | chr7:34486749-34487317 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 284 |
| Conread position: | 18-563 |
| Cow position: | chr7:6647824-6647260 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 310 |
| Conread position: | 18-563 |
| Cow position: | chr7:21126829-21126259 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 564 |
| Conread position: | 18-565 |
| Cow position: | chr7:38397648-38398230 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 18-574 |
| Cow position: | chr7:21234180-21233585 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 208 |
| Conread position: | 18-589 |
| Cow position: | chr7:13533067-13532470 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 346 |
| Conread position: | 18-589 |
| Cow position: | chr7:27101461-27100851 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 164 |
| Conread position: | 18-596 |
| Cow position: | chr7:11447392-11448015 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 306 |
| Conread position: | 18-596 |
| Cow position: | chr7:25440343-25440949 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 264 |
| Conread position: | 18-627 |
| Cow position: | chr7:33405407-33404786 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 398 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 19-311 |
| Cow position: | chr7:19269594-19269298 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 68, 244 |
| Conread position: | 19-315 |
| Cow position: | chr7:7211162-7210858 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 77, 205 |
| Conread position: | 20-429 |
| Cow position: | chr7:48805902-48805478 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 307 |
| Conread position: | 20-471 |
| Cow position: | chr7:11463211-11462752 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 248 |
| Conread position: | 20-552 |
| Cow position: | chr7:24058276-24058838 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 243 |
| Conread position: | 23-554 |
| Cow position: | chr7:39097651-39097145 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 69 |
| Conread position: | 23-573 |
| Cow position: | chr7:6720982-6721559 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 302 |
| Conread position: | 23-589 |
| Cow position: | chr7:21986266-21986847 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 357 |
| Conread position: | 27-414 |
| Cow position: | chr7:34150149-34150543 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 363 |
| Conread position: | 29-455 |
| Cow position: | chr7:20785130-20784695 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 45-471 |
| Cow position: | chr7:33312090-33311653 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 168 |
| Conread position: | 67-549 |
| Cow position: | chr7:68333828-68334325 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 109-551 |
| Cow position: | chr7:58376942-58376493 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 122 |
| Conread position: | 340-554 |
| Cow position: | chr7:995923-996149 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 141, 0 |
Show alignments to all cow chromosomes.