Cow genome map
| Conread name: | Thy1-THY010019C10 |
| Conread position: | 1-379 |
| Cow position: | chr8:4785870-4785490 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 271 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 24, 83 |
| Conread position: | 1-416 |
| Cow position: | chr8:38585338-38584919 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 1-462 |
| Cow position: | chr8:11969283-11968803 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 316 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 382 |
| Conread position: | 1-471 |
| Cow position: | chr8:42158983-42158512 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 282 |
| Conread position: | 1-471 |
| Cow position: | chr8:42656966-42656504 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 1-500 |
| Cow position: | chr8:76576-76082 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 160 |
| Conread position: | 2-389 |
| Cow position: | chr8:25417852-25417454 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 73 |
| Conread position: | 2-565 |
| Cow position: | chr8:25523408-25524002 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 198 |
| Conread position: | 8-471 |
| Cow position: | chr8:6064768-6064303 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 319 |
| Conread position: | 8-563 |
| Cow position: | chr8:32041735-32041169 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 392 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 101, 185 |
| Conread position: | 8-596 |
| Cow position: | chr8:9736249-9736874 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 318 |
| Conread position: | 8-596 |
| Cow position: | chr8:32631017-32630401 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 316 |
| Conread position: | 9-563 |
| Cow position: | chr8:19330725-19331308 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 20 |
| Conread position: | 18-293 |
| Cow position: | chr8:11832730-11833011 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 54, 213 |
| Conread position: | 18-345 |
| Cow position: | chr8:44243560-44243225 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 78, 207 |
| Conread position: | 18-368 |
| Cow position: | chr8:30891295-30890934 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 79, 305 |
| Conread position: | 18-376 |
| Cow position: | chr8:59141344-59141714 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 92, 289 |
| Conread position: | 18-377 |
| Cow position: | chr8:8315440-8315068 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 18-393 |
| Cow position: | chr8:8556127-8555742 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 5 |
| Conread position: | 18-465 |
| Cow position: | chr8:33589396-33589856 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 18-471 |
| Cow position: | chr8:1153297-1152818 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 22 |
| Conread position: | 18-471 |
| Cow position: | chr8:1320063-1320523 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 60 |
| Conread position: | 18-471 |
| Cow position: | chr8:3785657-3786121 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 18-471 |
| Cow position: | chr8:8308615-8309089 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 211 |
| Conread position: | 18-471 |
| Cow position: | chr8:22571289-22570825 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 232 |
| Conread position: | 18-471 |
| Cow position: | chr8:24915315-24914848 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 18-471 |
| Cow position: | chr8:37654847-37654379 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 284 |
| Conread position: | 18-471 |
| Cow position: | chr8:42484937-42485400 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 249 |
| Conread position: | 18-471 |
| Cow position: | chr8:56883521-56884005 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 94, 471 |
| Conread position: | 18-471 |
| Cow position: | chr8:61906180-61906644 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 306 |
| Conread position: | 18-563 |
| Cow position: | chr8:3855994-3855430 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 81 |
| Conread position: | 18-563 |
| Cow position: | chr8:4687423-4687996 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 404 |
| Conread position: | 18-563 |
| Cow position: | chr8:17312044-17312627 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 428 |
| Conread position: | 18-563 |
| Cow position: | chr8:32437064-32436488 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 331 |
| Conread position: | 18-563 |
| Cow position: | chr8:36635478-36634915 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 244 |
| Conread position: | 18-563 |
| Cow position: | chr8:46051208-46051779 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 190 |
| Conread position: | 18-563 |
| Cow position: | chr8:59261897-59261345 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 19 |
| Conread position: | 18-563 |
| Cow position: | chr8:60061404-60061991 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 393 |
| Conread position: | 18-565 |
| Cow position: | chr8:29007663-29008232 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 246 |
| Conread position: | 18-573 |
| Cow position: | chr8:34348694-34349275 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 315 |
| Conread position: | 18-582 |
| Cow position: | chr8:47661299-47660708 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 566 |
| Conread position: | 18-587 |
| Cow position: | chr8:47068792-47068187 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 317 |
| Conread position: | 18-588 |
| Cow position: | chr8:7161918-7162517 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 249 |
| Conread position: | 18-588 |
| Cow position: | chr8:14590881-14590299 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 314 |
| Conread position: | 18-589 |
| Cow position: | chr8:22128593-22129198 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 22 |
| Conread position: | 19-378 |
| Cow position: | chr8:11822310-11822673 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 159, 82 |
| Conread position: | 19-483 |
| Cow position: | chr8:37932112-37932590 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 304 |
| Conread position: | 20-552 |
| Cow position: | chr8:13698159-13697630 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 354 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 90, 169 |
| Conread position: | 20-621 |
| Cow position: | chr8:14927856-14927253 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 67 |
| Conread position: | 23-465 |
| Cow position: | chr8:25408756-25409206 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 363 |
| Conread position: | 161-563 |
| Cow position: | chr8:4305220-4305646 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 287 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 102, 292 |
| Conread position: | 167-564 |
| Cow position: | chr8:54516952-54517353 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 267-554 |
| Cow position: | chr8:46454497-46454215 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 289-554 |
| Cow position: | chr8:51857305-51857569 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 48, 83 |
| Conread position: | 331-563 |
| Cow position: | chr8:9061503-9061739 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 152, 38 |
Show alignments to all cow chromosomes.