Cow genome map

Conread name: Thy1-THY010019C10

Conread position: 1-465
Cow position: chr9:60277364-60276890 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 270

Conread position: 1-471
Cow position: chr9:3763655-3764134 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 61

Conread position: 1-548
Cow position: chr9:25633354-25632786 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 263

Conread position: 1-554
Cow position: chr9:4649943-4649373 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 191

Conread position: 2-337
Cow position: chr9:7003461-7003805 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 111, 328

Conread position: 2-465
Cow position: chr9:29027556-29027082 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 266

Conread position: 2-563
Cow position: chr9:1980924-1981515 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 319

Conread position: 2-563
Cow position: chr9:28022456-28023052 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 212

Conread position: 5-471
Cow position: chr9:1251338-1250865 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 313
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 96, 327

Conread position: 8-563
Cow position: chr9:221866-221273 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 250

Conread position: 8-596
Cow position: chr9:3005585-3004960 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 70

Conread position: 8-596
Cow position: chr9:4943149-4942525 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 263

Conread position: 8-597
Cow position: chr9:17063727-17063099 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 327

Conread position: 18-223
Cow position: chr9:6829643-6829432 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 18-223
Cow position: chr9:59173473-59173262 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 18-240
Cow position: chr9:42569577-42569806 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 87, 22

Conread position: 18-365
Cow position: chr9:2186550-2186910 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 191, 91

Conread position: 18-391
Cow position: chr9:1075545-1075160 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 257
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 91, 307

Conread position: 18-393
Cow position: chr9:25035040-25034653 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 306

Conread position: 18-421
Cow position: chr9:3543533-3543935 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 287

Conread position: 18-432
Cow position: chr9:5515091-5515515 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 204

Conread position: 18-465
Cow position: chr9:2498310-2497850 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 308
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 196, 51

Conread position: 18-465
Cow position: chr9:30673038-30673504 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 250

Conread position: 18-470
Cow position: chr9:37970524-37970073 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 313

Conread position: 18-471
Cow position: chr9:780133-779686 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 176

Conread position: 18-471
Cow position: chr9:25903182-25903640 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 196

Conread position: 18-471
Cow position: chr9:28678642-28679107 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 306

Conread position: 18-471
Cow position: chr9:51211352-51211816 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 305

Conread position: 18-558
Cow position: chr9:9013773-9014330 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 344

Conread position: 18-563
Cow position: chr9:6249972-6250548 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 150

Conread position: 18-563
Cow position: chr9:18509141-18508576 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 245

Conread position: 18-565
Cow position: chr9:4533167-4533747 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 60

Conread position: 18-565
Cow position: chr9:59536769-59537352 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 45

Conread position: 18-566
Cow position: chr9:54925224-54925793 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 359

Conread position: 19-554
Cow position: chr9:35316192-35315651 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 97

Conread position: 19-565
Cow position: chr9:51181512-51180925 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 19-587
Cow position: chr9:64015968-64015398 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 174

Conread position: 23-348
Cow position: chr9:2171724-2172066 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 0

Conread position: 23-563
Cow position: chr9:37162136-37161558 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 240

Conread position: 34-471
Cow position: chr9:45874022-45874473 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 292

Conread position: 45-596
Cow position: chr9:2211835-2212424 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 380
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 64, 181

Conread position: 147-554
Cow position: chr9:5141528-5141940 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 111

Conread position: 320-588
Cow position: chr9:3309609-3309888 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 54

Conread position: 336-554
Cow position: chr9:4666188-4666410 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 147, 20

Conread position: 337-549
Cow position: chr9:49303656-49303430 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 133, 114

Show alignments to all cow chromosomes.