Cow genome map


           Conread name:
           Thy1-THY010019C10
        

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 257
               

               Conread position:
               1-493
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 139
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 43
               

               Conread position:
               1-554
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 175
               

               Conread position:
               1-563
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               2-455
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 7
               

               Conread position:
               2-465
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               2-471
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 171
               

               Conread position:
               2-558
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 365
               

               Conread position:
               2-582
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 267
               

               Conread position:
               2-603
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 333
               

               Conread position:
               5-192
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               5-334
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               21, 129
               

               Conread position:
               5-562
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 284
               

               Conread position:
               7-276
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               7-595
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 317
               

               Conread position:
               8-256
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               8-263
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               8-471
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 196
               

               Conread position:
               8-476
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 241
               

               Conread position:
               8-563
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 260
               

               Conread position:
               9-471
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 209
               

               Conread position:
               10-471
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               14-428
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 258
               

               Conread position:
               18-277
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               94, 221
               

               Conread position:
               18-284
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               18-331
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               81, 180
               

               Conread position:
               18-418
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               282
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               81, 222
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               297
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               81, 52
               

               Conread position:
               18-466
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 249
               

               Conread position:
               18-470
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 307
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 305
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 231
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 25
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 311
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 195
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 307
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 314
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 140
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 19
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 60
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 274
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 180
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 270
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 22
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 64
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 305
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 64
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 266
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 142
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 25
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 305
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 22
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 313
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               320, 81
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 305
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 307
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               18-476
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 314
               

               Conread position:
               18-476
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 127
               

               Conread position:
               18-493
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 257
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 26
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 117
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 8
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 214
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 361
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 305
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 382
               

               Conread position:
               18-565
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 248
               

               Conread position:
               18-567
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 247
               

               Conread position:
               18-580
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 370
               

               Conread position:
               18-587
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 312
               

               Conread position:
               18-590
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 309
               

               Conread position:
               18-590
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 309
               

               Conread position:
               18-596
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 312
               

               Conread position:
               19-378
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               83, 277
               

               Conread position:
               19-464
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 116
               

               Conread position:
               19-465
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               19-467
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 121
               

               Conread position:
               19-470
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               312
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               83, 278
               

               Conread position:
               19-471
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 220
               

               Conread position:
               19-563
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 375
               

               Conread position:
               19-588
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 54
               

               Conread position:
               19-591
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 307
               

               Conread position:
               20-416
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 308
               

               Conread position:
               23-465
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 197
               

               Conread position:
               46-471
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 94
               

               Conread position:
               117-549
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               252, 55
               

               Conread position:
               130-554
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 76
               

               Conread position:
               239-551
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               194, 79
               
Show alignments to all cow chromosomes.