Cow genome map

Conread name: Thy1-THY010022H12

Conread position: 1-144
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 1-197
Cow position:
Alignm length: 197
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 1-287
Cow position:
Alignm length: 288
Alignm identity: 202
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 19, 45

Conread position: 1-297
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 145, 17

Conread position: 2-213
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 74, 147

Conread position: 2-213
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 145, 17

Conread position: 2-283
Cow position:
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 143

Conread position: 2-286
Cow position:
Alignm length: 286
Alignm identity: 204
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 119, 85

Conread position: 2-287
Cow position:
Alignm length: 290
Alignm identity: 212
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 95, 125

Conread position: 2-287
Cow position:
Alignm length: 286
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 3-188
Cow position:
Alignm length: 189
Alignm identity: 149
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 88, 146

Conread position: 3-224
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 199, 88

Conread position: 3-282
Cow position:
Alignm length: 285
Alignm identity: 207
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 78, 152

Conread position: 3-284
Cow position:
Alignm length: 286
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 147

Conread position: 4-187
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 16

Conread position: 4-187
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 16

Conread position: 4-188
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 82, 117

Conread position: 4-193
Cow position:
Alignm length: 196
Alignm identity: 152
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 116, 88

Conread position: 4-193
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 4-194
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 4-194
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 82, 146

Conread position: 4-194
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 93, 146

Conread position: 4-194
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 4-194
Cow position:
Alignm length: 193
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 144

Conread position: 4-194
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 82, 147

Conread position: 4-194
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 86, 144

Conread position: 4-194
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 4-212
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 26, 115

Conread position: 4-214
Cow position:
Alignm length: 222
Alignm identity: 168
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 84, 30

Conread position: 4-214
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 186, 37

Conread position: 4-215
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 4-219
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 82, 146

Conread position: 4-224
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 86, 145

Conread position: 4-224
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 24

Conread position: 4-224
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 4-244
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 139, 0

Conread position: 4-263
Cow position:
Alignm length: 264
Alignm identity: 198
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 93, 30

Conread position: 4-270
Cow position:
Alignm length: 270
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 153

Conread position: 4-273
Cow position:
Alignm length: 273
Alignm identity: 201
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 95, 149

Conread position: 4-275
Cow position:
Alignm length: 275
Alignm identity: 206
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 80, 120

Conread position: 4-275
Cow position:
Alignm length: 276
Alignm identity: 199
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 93, 127

Conread position: 4-279
Cow position:
Alignm length: 280
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 93, 50

Conread position: 4-283
Cow position:
Alignm length: 284
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 93, 146

Conread position: 4-285
Cow position:
Alignm length: 287
Alignm identity: 204
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 93, 140

Conread position: 4-287
Cow position:
Alignm length: 288
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 84, 133

Conread position: 4-287
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 69, 18

Conread position: 4-287
Cow position:
Alignm length: 284
Alignm identity: 208
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 87, 0

Conread position: 4-287
Cow position:
Alignm length: 288
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 146

Conread position: 4-287
Cow position:
Alignm length: 287
Alignm identity: 202
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 85, 145

Conread position: 4-287
Cow position:
Alignm length: 286
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 88

Conread position: 4-287
Cow position:
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 149

Conread position: 4-287
Cow position:
Alignm length: 288
Alignm identity: 210
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 66, 83

Conread position: 4-287
Cow position:
Alignm length: 289
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 145

Conread position: 4-287
Cow position:
Alignm length: 288
Alignm identity: 208
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 93, 55

Conread position: 4-287
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 142, 0

Conread position: 4-287
Cow position:
Alignm length: 288
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 87, 146

Conread position: 4-287
Cow position:
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 117

Conread position: 4-287
Cow position:
Alignm length: 288
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 93, 146

Conread position: 4-287
Cow position:
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 147

Conread position: 4-287
Cow position:
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 24

Conread position: 4-287
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 81, 150

Conread position: 4-287
Cow position:
Alignm length: 287
Alignm identity: 204
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 72, 12

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 210
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 93, 147

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 206
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 93, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 93, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 93, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 82, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 93, 56

Conread position: 4-288
Cow position:
Alignm length: 286
Alignm identity: 208
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 113, 91

Conread position: 4-288
Cow position:
Alignm length: 286
Alignm identity: 208
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 113, 91

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 147

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 214
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 87, 137

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 211
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 82, 24

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 210
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 87, 145

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 215
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 82, 75

Conread position: 4-288
Cow position:
Alignm length: 285
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 80, 0

Conread position: 4-288
Cow position:
Alignm length: 288
Alignm identity: 212
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 79, 145

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 93, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 147

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 212
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 84, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 211
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 84, 146

Conread position: 4-288
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 53

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 79, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 208
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 93, 136

Conread position: 4-288
Cow position:
Alignm length: 291
Alignm identity: 212
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 93, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 93, 139

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 215
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 93, 137

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 93, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 93, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 78, 146

Conread position: 4-288
Cow position:
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 146

Conread position: 4-293
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 92, 60

Conread position: 4-293
Cow position:
Alignm length: 296
Alignm identity: 218
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 28

Conread position: 4-293
Cow position:
Alignm length: 297
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 60

Conread position: 4-293
Cow position:
Alignm length: 296
Alignm identity: 209
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 106, 146

Conread position: 4-293
Cow position:
Alignm length: 294
Alignm identity: 215
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 91, 146

Conread position: 4-293
Cow position:
Alignm length: 305
Alignm identity: 223
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 78, 158

Conread position: 4-294
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 88, 0

Conread position: 4-296
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 87, 25

Conread position: 4-296
Cow position:
Alignm length: 299
Alignm identity: 211
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 139

Conread position: 4-299
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 41

Conread position: 4-299
Cow position:
Alignm length: 301
Alignm identity: 215
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 93, 148

Conread position: 4-299
Cow position:
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 148

Conread position: 4-304
Cow position:
Alignm length: 308
Alignm identity: 222
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 79, 150

Conread position: 5-194
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 86, 142

Conread position: 5-205
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 84, 52

Conread position: 5-222
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 92, 5

Conread position: 5-275
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 149

Conread position: 5-284
Cow position:
Alignm length: 283
Alignm identity: 207
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 5, 83

Conread position: 5-288
Cow position:
Alignm length: 288
Alignm identity: 211
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 92, 145

Conread position: 6-194
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 145

Conread position: 6-284
Cow position:
Alignm length: 280
Alignm identity: 200
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 85, 170

Conread position: 6-287
Cow position:
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 51

Conread position: 6-287
Cow position:
Alignm length: 282
Alignm identity: 202
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 27, 0

Conread position: 6-316
Cow position:
Alignm length: 323
Alignm identity: 239
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 79, 27

Conread position: 7-194
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 123

Conread position: 11-287
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 86, 139

Conread position: 13-211
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 70, 139

Conread position: 16-247
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 81, 135

Conread position: 16-275
Cow position:
Alignm length: 262
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 128, 44

Conread position: 17-287
Cow position:
Alignm length: 275
Alignm identity: 204
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 74, 133

Conread position: 18-201
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 166, 59

Conread position: 18-301
Cow position:
Alignm length: 284
Alignm identity: 196
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 19-212
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 133

Conread position: 22-287
Cow position:
Alignm length: 270
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 122

Conread position: 27-206
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 9

Conread position: 34-251
Cow position:
Alignm length: 218
Alignm identity: 170
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 113, 0

Conread position: 36-225
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 54, 105

Conread position: 42-194
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 109

Conread position: 45-288
Cow position:
Alignm length: 248
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 105

Conread position: 53-293
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 99

Conread position: 55-284
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 36, 96

Conread position: 63-288
Cow position:
Alignm length: 240
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 87

Conread position: 67-286
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 0

Show alignments to all cow chromosomes.