Cow genome map


           Conread name:
           Thy1-THY010022H12
        

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               238, 59
               

               Conread position:
               2-286
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               216
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               88, 65
               

               Conread position:
               2-288
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 145
               

               Conread position:
               3-187
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               76, 154
               

               Conread position:
               3-283
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               150, 88
               

               Conread position:
               3-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               3-293
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 83
               

               Conread position:
               3-293
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 148
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 144
               

               Conread position:
               4-177
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               72, 148
               

               Conread position:
               4-180
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               4-192
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-194
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-194
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-198
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               87, 75
               

               Conread position:
               4-198
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               188, 139
               

               Conread position:
               4-205
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               50, 74
               

               Conread position:
               4-205
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               86, 134
               

               Conread position:
               4-206
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               43, 81
               

               Conread position:
               4-209
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 143
               

               Conread position:
               4-211
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               88, 156
               

               Conread position:
               4-212
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               75, 147
               

               Conread position:
               4-212
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               89, 147
               

               Conread position:
               4-213
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               87, 39
               

               Conread position:
               4-213
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               4-213
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               10, 151
               

               Conread position:
               4-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               23, 8
               

               Conread position:
               4-248
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               79, 61
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               4-266
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               80, 54
               

               Conread position:
               4-269
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-275
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               87, 146
               

               Conread position:
               4-275
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               85, 137
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               93, 144
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               211
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               93, 137
               

               Conread position:
               4-284
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 99
               

               Conread position:
               4-285
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-285
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               270, 83
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               59, 148
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               87, 146
               

               Conread position:
               4-287
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               87, 24
               

               Conread position:
               4-287
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               82, 143
               

               Conread position:
               4-287
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               93, 139
               

               Conread position:
               4-287
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 75
               

               Conread position:
               4-287
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 146
               

               Conread position:
               4-287
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               85, 154
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 147
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               87, 146
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               93, 153
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               93, 138
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               87, 147
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               64, 153
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               93, 134
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 137
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               86, 146
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               82, 137
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               93, 129
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               94, 146
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               75, 147
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               82, 146
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               93, 25
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               93, 140
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 137
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               84, 146
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               93, 75
               

               Conread position:
               4-293
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               4-293
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               63, 30
               

               Conread position:
               4-294
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               76, 147
               

               Conread position:
               4-295
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               47, 23
               

               Conread position:
               4-297
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               45, 88
               

               Conread position:
               4-300
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 121
               

               Conread position:
               5-284
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               50, 78
               

               Conread position:
               5-288
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 144
               

               Conread position:
               6-194
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               6-212
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               78, 28
               

               Conread position:
               10-188
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               11-180
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               86, 139
               

               Conread position:
               11-287
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               86, 148
               

               Conread position:
               11-288
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               86, 139
               

               Conread position:
               12-194
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               82, 130
               

               Conread position:
               16-288
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               81, 125
               

               Conread position:
               16-288
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               81, 135
               

               Conread position:
               17-275
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               69, 133
               

               Conread position:
               27-224
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 87
               

               Conread position:
               28-213
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               9, 126
               

               Conread position:
               35-289
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               79, 63
               

               Conread position:
               35-289
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               44, 112
               

               Conread position:
               45-327
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               28, 103
               

               Conread position:
               113-295
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 0
               
Show alignments to all cow chromosomes.