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Cow genome map

           
Conread name:
           
Thy1-THY010022H12
        

               
Conread position:
               
1-148
               

               
Cow position:
               
chr28:22279831-22279979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr28:34200094-34200287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr28:10575416-10575627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
189, 138
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr28:34850761-34850551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
83, 69
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr28:3745559-3745340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
189, 37
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr28:25726733-25726476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 40
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr28:1811387-1811644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
2-192
               

               
Cow position:
               
chr28:330202-330393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
2-194
               

               
Cow position:
               
chr28:16386942-16386760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr28:1837354-1837129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr28:1550449-1550171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr28:7744712-7744431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
70, 154
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr28:19194126-19193853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
89, 154
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr28:28357177-28357450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr28:15916918-15917193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 149
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr28:600581-600860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
134, 83
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr28:34841079-34840892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
80, 111
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr28:5773014-5772809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr28:30532388-30532594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
80, 146
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr28:25166408-25166627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
4-133
               

               
Cow position:
               
chr28:17315001-17314868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
4-135
               

               
Cow position:
               
chr28:22353716-22353588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
4-177
               

               
Cow position:
               
chr28:13536282-13536108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr28:24603532-24603355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
87, 130
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr28:34581747-34581924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chr28:19185829-19185646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr28:26728060-26728243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr28:11256281-11256471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
138, 79
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr28:786264-786076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr28:2280318-2280506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 138
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr28:2422315-2422124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr28:10563010-10562819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr28:10642938-10643128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
87, 142
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr28:12981201-12981392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
82, 137
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr28:13889389-13889580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
79, 146
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr28:25804477-25804286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
81, 146
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr28:34655689-34655498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
4-197
               

               
Cow position:
               
chr28:15429269-15429075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 149
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr28:14234342-14234157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr28:34878844-34879046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
94, 146
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr28:27711895-27711691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
77, 129
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr28:10530119-10530323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr28:2123160-2122958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr28:3068478-3068282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr28:12226913-12227115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
92, 73
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr28:25248726-25248516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
62, 147
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr28:29074834-29075029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
143, 79
               

               
Conread position:
               
4-234
               

               
Cow position:
               
chr28:14227220-14227007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr28:13693085-13692842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 151
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr28:5792062-5791817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr28:10772682-10772422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr28:13473216-13472956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
87, 149
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr28:13865156-13864896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr28:17369659-17369399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
82, 138
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr28:22735680-22735431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr28:34082664-34082926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 147
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr28:1956969-1956702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr28:10295396-10295137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
272, 67
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr28:23544229-23543960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
68, 140
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr28:23793970-23794241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
75, 158
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr28:2222760-2223026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
93, 63
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr28:15265776-15266045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr28:6060695-6060956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 143
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr28:24487789-24488051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr28:24671630-24671360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 146
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr28:12406571-12406828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
270, 87
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr28:29199084-29198812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
53, 148
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr28:33640174-33639902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
84, 146
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:1508484-1508206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
78, 120
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:3188411-3188683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:3653202-3652936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
143, 51
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:4069552-4069288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:7981357-7981625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
87, 138
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:12429810-12429539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:12650822-12650552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
93, 61
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:13463569-13463297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
87, 131
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:17663343-17663615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:25070451-25070181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 144
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:25409236-25408970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
81, 139
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:25829001-25828729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:29036045-29036318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
64, 147
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:29806839-29807107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:29823791-29823519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
93, 134
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:30098482-30098210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr28:32589305-32589033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 147
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:482104-482374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
86, 145
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:1198801-1198529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:1943690-1943962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:2645319-2645049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:3001260-3001525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:3627619-3627347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:4957896-4958171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
81, 145
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:5336199-5336471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:5637656-5637384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:6478824-6478552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:6535191-6535464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 147
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:7059836-7059564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 147
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:7830164-7829891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:7888479-7888751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:7906941-7907212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 75
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:9287787-9288059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:9710548-9710820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:10303443-10303172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
79, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:10870695-10870424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:12701473-12701201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 147
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:13523286-13523017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:13607037-13606762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 152
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:14666742-14666478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:15054762-15054490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:21380096-21379826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:21896887-21896616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
93, 129
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:23309730-23310002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:24886465-24886194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:24993093-24992821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 147
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:25826507-25826785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:25850164-25849895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:26923025-26923295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 61
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:28934357-28934629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:29222680-29222951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 111
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:29435199-29435473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 151
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:30031945-30031676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr28:30249732-30249460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr28:12156285-12156009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr28:5804869-5804595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 144
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr28:10162825-10162554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr28:24997305-24997585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr28:30328320-30328600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
61, 150
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr28:5941092-5940815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr28:12935667-12935945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
45, 146
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr28:26419395-26419673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr28:20310542-20310259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
82, 147
               

               
Conread position:
               
4-297
               

               
Cow position:
               
chr28:14512037-14511752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
4-297
               

               
Cow position:
               
chr28:23868840-23868564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 89
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr28:17392039-17391757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr28:20967063-20967345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr28:5825451-5825173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
110, 87
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr28:22201551-22201277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr28:29473604-29473313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
77, 155
               

               
Conread position:
               
4-316
               

               
Cow position:
               
chr28:20964269-20964569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 147
               

               
Conread position:
               
5-148
               

               
Cow position:
               
chr28:31842333-31842487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr28:13143313-13143508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
185, 57
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr28:11787354-11787609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
93, 145
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr28:1383848-1384118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
105, 86
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr28:5768552-5768283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 29
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr28:13357360-13357627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
73, 142
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr28:21569493-21569217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
141, 36
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr28:14150592-14150314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr28:30966810-30966526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
77, 149
               

               
Conread position:
               
6-188
               

               
Cow position:
               
chr28:27029729-27029907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr28:11356583-11356817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
88, 153
               

               
Conread position:
               
6-286
               

               
Cow position:
               
chr28:16597751-16597481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
91, 144
               

               
Conread position:
               
8-284
               

               
Cow position:
               
chr28:21104377-21104640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 146
               

               
Conread position:
               
11-283
               

               
Cow position:
               
chr28:32785839-32786089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
12-206
               

               
Cow position:
               
chr28:34677614-34677804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 76
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr28:5117494-5117230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
121, 33
               

               
Conread position:
               
13-188
               

               
Cow position:
               
chr28:17151677-17151503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
76, 11
               

               
Conread position:
               
14-293
               

               
Cow position:
               
chr28:23675393-23675142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
15-202
               

               
Cow position:
               
chr28:7814234-7814050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
16-266
               

               
Cow position:
               
chr28:22322600-22322363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
16-287
               

               
Cow position:
               
chr28:33255914-33255655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
75, 127
               

               
Conread position:
               
19-197
               

               
Cow position:
               
chr28:15497900-15498069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
19-293
               

               
Cow position:
               
chr28:16211742-16212005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 134
               

               
Conread position:
               
21-283
               

               
Cow position:
               
chr28:15032512-15032763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 129
               

               
Conread position:
               
22-251
               

               
Cow position:
               
chr28:5367771-5367989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 127
               

               
Conread position:
               
23-208
               

               
Cow position:
               
chr28:7373161-7373353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
51, 135
               

               
Conread position:
               
26-287
               

               
Cow position:
               
chr28:6473673-6473922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
65, 123
               

               
Conread position:
               
27-288
               

               
Cow position:
               
chr28:13725513-13725267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
64, 113
               

               
Conread position:
               
28-286
               

               
Cow position:
               
chr28:30870653-30870407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
29-194
               

               
Cow position:
               
chr28:32764787-32764626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
30-288
               

               
Cow position:
               
chr28:10280414-10280176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
138, 7
               

               
Conread position:
               
36-288
               

               
Cow position:
               
chr28:444982-444742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
50, 108
               

               
Conread position:
               
36-288
               

               
Cow position:
               
chr28:13323707-13323467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
61, 114
               

               
Conread position:
               
45-288
               

               
Cow position:
               
chr28:10194040-10194271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 105
               

               
Conread position:
               
49-288
               

               
Cow position:
               
chr28:24588685-24588912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
37, 102
               

               
Conread position:
               
69-287
               

               
Cow position:
               
chr28:7784688-7784888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               
Show alignments to all cow chromosomes.