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Cow genome map

           
Conread name:
           
Thy1-THY010022H12
        

               
Conread position:
               
1-181
               

               
Cow position:
               
chr4:30997071-30997250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr4:18099648-18099850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 150
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr4:32249790-32249581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr4:58485172-58485378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
77, 84
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr4:53544760-53544524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
113, 78
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr4:4379672-4379397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 149
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr4:33171455-33171180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
96, 149
               

               
Conread position:
               
2-144
               

               
Cow position:
               
chr4:9519521-9519375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr4:41189211-41189369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
81, 105
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr4:1436376-1436586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr4:47752616-47752353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
236, 143
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr4:2263413-2263680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr4:39421893-39421619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
89, 148
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr4:46667950-46667683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr4:10403417-10403691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 148
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr4:38181047-38180775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr4:38972919-38972736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 136
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr4:42960955-42960768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 52
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr4:44777895-44778168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
83, 147
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr4:37786596-37786322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 140
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr4:2140356-2140073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
4-172
               

               
Cow position:
               
chr4:38707783-38707948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr4:54494179-54494010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
96, 144
               

               
Conread position:
               
4-179
               

               
Cow position:
               
chr4:35261091-35261267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 143
               

               
Conread position:
               
4-179
               

               
Cow position:
               
chr4:47020599-47020420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 149
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr4:28855406-28855229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 138
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr4:31868580-31868403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
93, 147
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr4:38834818-38834995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-184
               

               
Cow position:
               
chr4:13139993-13140158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
4-184
               

               
Cow position:
               
chr4:26008563-26008391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr4:8377844-8378026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 135
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr4:21532286-21532463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
87, 107
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chr4:16859425-16859606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
95, 144
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr4:5284543-5284729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
64, 145
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr4:43070102-43069916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr4:49031982-49031799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 155
               

               
Conread position:
               
4-191
               

               
Cow position:
               
chr4:19006788-19006600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
82, 145
               

               
Conread position:
               
4-193
               

               
Cow position:
               
chr4:19744275-19744079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
88, 58
               

               
Conread position:
               
4-193
               

               
Cow position:
               
chr4:21258964-21258768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
27, 149
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr4:3800993-3801184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr4:4923976-4924167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr4:13500686-13500877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr4:21364544-21364353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr4:23647484-23647670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr4:27655383-27655192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr4:29560233-29560424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr4:33613317-33613511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr4:43476496-43476686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr4:46585611-46585802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr4:22841690-22841504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr4:50978048-50977851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
188, 133
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr4:41602201-41602015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr4:52696539-52696342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr4:42330435-42330640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr4:30573254-30573049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
87, 147
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr4:33146153-33145943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr4:22237129-22237332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
142, 78
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr4:19264960-19264751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
186, 138
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr4:53316741-53316957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
81, 146
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr4:45235501-45235716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
87, 145
               

               
Conread position:
               
4-224
               

               
Cow position:
               
chr4:28613174-28612958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
91, 114
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr4:11025922-11026149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 151
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr4:38918179-38918420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 140
               

               
Conread position:
               
4-244
               

               
Cow position:
               
chr4:120394-120623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-244
               

               
Cow position:
               
chr4:66020689-66020461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
4-247
               

               
Cow position:
               
chr4:6547393-6547625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr4:7139070-7139311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr4:11872555-11872804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr4:22024805-22025052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr4:22014128-22014384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 144
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr4:16967013-16967260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr4:17833553-17833816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr4:42863453-42863201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr4:61400062-61400321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr4:10884933-10884668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr4:11107790-11108058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 72
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr4:43898594-43898857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 14
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr4:21044865-21045133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr4:26400068-26399817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr4:27337507-27337243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
93, 135
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr4:60224582-60224846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr4:61651258-61651537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr4:2191002-2191270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 142
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr4:48153030-48153284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr4:1368774-1369041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 140
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr4:3252256-3252524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr4:3450094-3449826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
87, 51
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr4:4185463-4185202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
158, 74
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr4:12605586-12605853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr4:17775467-17775745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr4:18812914-18813186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr4:54695736-54696006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
86, 143
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:359178-358904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:3129151-3128880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:7806464-7806192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:10044473-10044743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
93, 151
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:11201162-11200892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:14164082-14163811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:16363496-16363224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:16642111-16641842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:17067817-17068088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 143
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:22850383-22850651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 102
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:27178120-27177850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:29530163-29530433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
87, 63
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:33069544-33069815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:36899672-36899400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
93, 145
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:38584173-38583904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
86, 143
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:39457965-39457684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 147
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:41962192-41961921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
84, 146
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:43316353-43316625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:43896201-43896482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
68, 145
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:46529957-46530222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
87, 147
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:48030154-48029882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:48732972-48732700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:49744967-49744695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
78, 146
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:54757963-54758231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:55509547-55509831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 159
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:55670536-55670268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
75, 147
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:67767715-67767443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:162376-162105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:533586-533314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:606901-606629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
93, 144
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:652323-652051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:1007188-1006917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:1499800-1500068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:1927339-1927611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:3170576-3170304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
82, 140
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:3354650-3354918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:3474966-3474700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
87, 151
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:4850637-4850365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:5441365-5441638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:7779695-7779424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:8678097-8677825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:8700434-8700163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
79, 139
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:9041242-9040970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:9357534-9357262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:10122702-10122430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:14684507-14684235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 147
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:15056099-15055827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:15617990-15617718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:15802543-15802815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:17033205-17033477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:17751646-17751910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
93, 137
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:17821826-17821554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:18005010-18004738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:18331382-18331110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:19049557-19049285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:19237365-19237090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 155
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:20616422-20616694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:20656768-20657037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
72, 144
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:21342369-21342097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:24140171-24139897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 151
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:24179182-24179454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:29034900-29034632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:30474676-30474403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 147
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:33399175-33399449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:35144249-35144521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:38564398-38564670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:44593107-44593379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
105, 66
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:46744122-46744385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
93, 136
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:47116132-47115860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:47264073-47263801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:47774296-47774568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
99, 87
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:47949043-47949315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 147
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:54161767-54162039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:58292026-58291764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:60579834-60580106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:61817108-61817380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:62906726-62906998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:62962067-62962336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:63195284-63195555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:64156024-64155752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:65198505-65198777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr4:68796000-68795728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr4:1239131-1239410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
51, 139
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr4:60856056-60855783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 146
               

               
Conread position:
               
4-292
               

               
Cow position:
               
chr4:11104414-11104677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
267, 30
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr4:1027930-1028214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 143
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr4:3849900-3849618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr4:6487072-6487349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr4:11193256-11192969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 149
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr4:22743681-22743408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
31, 125
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr4:25983572-25983303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
268, 96
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr4:27539961-27539682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr4:33181002-33181272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
273, 45
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr4:57988039-57987764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 140
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr4:65816375-65816640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
142, 24
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr4:65918968-65918698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr4:18845086-18844819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr4:41097263-41096993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr4:19957323-19957041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr4:23508492-23508214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 89
               

               
Conread position:
               
4-297
               

               
Cow position:
               
chr4:11100307-11100581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 141
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr4:26548759-26548483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr4:66174029-66174307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 51
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr4:68386821-68386538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
95, 56
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr4:10872045-10872330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
73, 149
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr4:68880819-68880526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 157
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr4:22317028-22316739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
75, 145
               

               
Conread position:
               
4-306
               

               
Cow position:
               
chr4:61065965-61065680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr4:26131454-26131161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
93, 147
               

               
Conread position:
               
4-323
               

               
Cow position:
               
chr4:45114095-45114407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr4:51122331-51122133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 149
               

               
Conread position:
               
5-207
               

               
Cow position:
               
chr4:8559017-8559225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 154
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr4:37703609-37703407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr4:509447-509253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr4:16735607-16735393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 143
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr4:20243451-20243180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 145
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr4:26874612-26874884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
66, 146
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr4:2226469-2226739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
92, 143
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr4:6446055-6445785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
81, 147
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr4:23451731-23451992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
86, 137
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr4:54170720-54170445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr4:2003285-2003491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
6-287
               

               
Cow position:
               
chr4:11918657-11918927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
6-287
               

               
Cow position:
               
chr4:27287813-27288083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
85, 144
               

               
Conread position:
               
6-288
               

               
Cow position:
               
chr4:6265922-6266192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
82, 144
               

               
Conread position:
               
6-288
               

               
Cow position:
               
chr4:21297491-21297757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
7-186
               

               
Cow position:
               
chr4:28150858-28150685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
8-186
               

               
Cow position:
               
chr4:7880114-7880289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 105
               

               
Conread position:
               
9-323
               

               
Cow position:
               
chr4:47252962-47253294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
74, 118
               

               
Conread position:
               
11-195
               

               
Cow position:
               
chr4:5874358-5874183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
12-275
               

               
Cow position:
               
chr4:25578881-25578635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
78, 128
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr4:4086080-4086350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
79, 140
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr4:34700271-34700533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr4:25352301-25352497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
133, 137
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr4:3284072-3284344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
81, 137
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr4:12841225-12840953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
15-285
               

               
Cow position:
               
chr4:5610726-5610984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
79, 136
               

               
Conread position:
               
15-293
               

               
Cow position:
               
chr4:16605877-16606156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
57, 148
               

               
Conread position:
               
16-244
               

               
Cow position:
               
chr4:67652148-67652365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
69, 134
               

               
Conread position:
               
16-294
               

               
Cow position:
               
chr4:21364351-21364087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 121
               

               
Conread position:
               
18-144
               

               
Cow position:
               
chr4:4673151-4673286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
18-194
               

               
Cow position:
               
chr4:17919504-17919678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 8
               

               
Conread position:
               
22-200
               

               
Cow position:
               
chr4:7048793-7048971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
23-259
               

               
Cow position:
               
chr4:8760557-8760332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr4:19790403-19790199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
11, 120
               

               
Conread position:
               
26-288
               

               
Cow position:
               
chr4:26885650-26885899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
27-287
               

               
Cow position:
               
chr4:54973317-54973074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 8
               

               
Conread position:
               
27-299
               

               
Cow position:
               
chr4:10993009-10993267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
71, 127
               

               
Conread position:
               
29-197
               

               
Cow position:
               
chr4:57557016-57556846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 118
               

               
Conread position:
               
29-287
               

               
Cow position:
               
chr4:27292637-27292864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
30-287
               

               
Cow position:
               
chr4:59452248-59452494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
67, 117
               

               
Conread position:
               
31-204
               

               
Cow position:
               
chr4:10200-10373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
47, 120
               

               
Conread position:
               
31-285
               

               
Cow position:
               
chr4:65581786-65581543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
68, 117
               

               
Conread position:
               
31-288
               

               
Cow position:
               
chr4:10424761-10424516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
34-202
               

               
Cow position:
               
chr4:9445541-9445711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 115
               

               
Conread position:
               
48-288
               

               
Cow position:
               
chr4:36074272-36074044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
50-287
               

               
Cow position:
               
chr4:23304091-23304317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
50-288
               

               
Cow position:
               
chr4:23525833-23525604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 139
               

               
Conread position:
               
71-288
               

               
Cow position:
               
chr4:25878644-25878445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 8
               

               
Conread position:
               
71-293
               

               
Cow position:
               
chr4:962368-962571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
83-283
               

               
Cow position:
               
chr4:11217966-11217782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
84-283
               

               
Cow position:
               
chr4:22073887-22074071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
98-288
               

               
Cow position:
               
chr4:27518160-27518348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
112-287
               

               
Cow position:
               
chr4:8936083-8935910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 85
               
Show alignments to all cow chromosomes.