Cow genome map

Conread name: Thy1-THY010032D09

Conread position: 1-174
Cow position:
Alignm length: 177
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 55

Conread position: 1-197
Cow position:
Alignm length: 197
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 1-205
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 108, 12

Conread position: 1-207
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 79, 97

Conread position: 1-207
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 83, 0

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 79, 0

Conread position: 1-212
Cow position:
Alignm length: 214
Alignm identity: 163
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 81, 14

Conread position: 1-213
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 79, 0

Conread position: 1-213
Cow position:
Alignm length: 216
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 55

Conread position: 1-213
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 1-310
Cow position:
Alignm length: 327
Alignm identity: 228
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 74, 252

Conread position: 1-423
Cow position:
Alignm length: 449
Alignm identity: 289
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 1-474
Cow position:
Alignm length: 499
Alignm identity: 336
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 195, 49

Conread position: 1-582
Cow position:
Alignm length: 625
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 283

Conread position: 1-618
Cow position:
Alignm length: 651
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 93

Conread position: 1-621
Cow position:
Alignm length: 660
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 415

Conread position: 1-640
Cow position:
Alignm length: 681
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 38

Conread position: 1-684
Cow position:
Alignm length: 732
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 1-731
Cow position:
Alignm length: 758
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 84

Conread position: 1-753
Cow position:
Alignm length: 806
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 63

Conread position: 1-771
Cow position:
Alignm length: 813
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 357

Conread position: 1-771
Cow position:
Alignm length: 813
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 57

Conread position: 1-771
Cow position:
Alignm length: 818
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 63

Conread position: 1-771
Cow position:
Alignm length: 825
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 79

Conread position: 1-771
Cow position:
Alignm length: 835
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 63

Conread position: 1-771
Cow position:
Alignm length: 823
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 21

Conread position: 1-772
Cow position:
Alignm length: 809
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 62

Conread position: 1-772
Cow position:
Alignm length: 829
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 655

Conread position: 1-773
Cow position:
Alignm length: 824
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 325

Conread position: 1-773
Cow position:
Alignm length: 819
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 610

Conread position: 1-773
Cow position:
Alignm length: 821
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 55

Conread position: 1-773
Cow position:
Alignm length: 834
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 124

Conread position: 1-773
Cow position:
Alignm length: 827
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 125

Conread position: 1-773
Cow position:
Alignm length: 833
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 763

Conread position: 1-773
Cow position:
Alignm length: 835
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 1-773
Cow position:
Alignm length: 827
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 84

Conread position: 1-773
Cow position:
Alignm length: 820
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 130

Conread position: 1-773
Cow position:
Alignm length: 807
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 113

Conread position: 1-773
Cow position:
Alignm length: 823
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 327

Conread position: 1-773
Cow position:
Alignm length: 824
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 1-773
Cow position:
Alignm length: 818
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 128

Conread position: 1-773
Cow position:
Alignm length: 826
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 120

Conread position: 1-773
Cow position:
Alignm length: 812
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 349

Conread position: 1-773
Cow position:
Alignm length: 804
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 110

Conread position: 1-773
Cow position:
Alignm length: 823
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 291

Conread position: 1-773
Cow position:
Alignm length: 829
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 327

Conread position: 1-773
Cow position:
Alignm length: 811
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 30

Conread position: 1-773
Cow position:
Alignm length: 825
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 95

Conread position: 1-773
Cow position:
Alignm length: 820
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 1-773
Cow position:
Alignm length: 837
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 642

Conread position: 1-773
Cow position:
Alignm length: 831
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 101

Conread position: 1-773
Cow position:
Alignm length: 802
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 20

Conread position: 1-774
Cow position:
Alignm length: 820
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 573

Conread position: 2-454
Cow position:
Alignm length: 469
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 273

Conread position: 2-773
Cow position:
Alignm length: 830
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 341

Conread position: 6-460
Cow position:
Alignm length: 480
Alignm identity: 326
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 199, 55

Conread position: 7-729
Cow position:
Alignm length: 737
Alignm identity: 454
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 71, 41

Conread position: 7-729
Cow position:
Alignm length: 739
Alignm identity: 458
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 71, 41

Conread position: 8-485
Cow position:
Alignm length: 514
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 328

Conread position: 8-554
Cow position:
Alignm length: 592
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 8-770
Cow position:
Alignm length: 816
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 8-771
Cow position:
Alignm length: 819
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 8-771
Cow position:
Alignm length: 818
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 8-771
Cow position:
Alignm length: 813
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 7

Conread position: 9-356
Cow position:
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 304

Conread position: 9-511
Cow position:
Alignm length: 534
Alignm identity: 363
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 216, 12

Conread position: 9-528
Cow position:
Alignm length: 545
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 52

Conread position: 15-665
Cow position:
Alignm length: 696
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 21-768
Cow position:
Alignm length: 790
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 11

Conread position: 27-773
Cow position:
Alignm length: 797
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 86

Conread position: 43-564
Cow position:
Alignm length: 561
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 255

Conread position: 67-773
Cow position:
Alignm length: 747
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 677

Conread position: 77-773
Cow position:
Alignm length: 729
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 48

Conread position: 127-412
Cow position:
Alignm length: 316
Alignm identity: 220
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 39

Conread position: 157-771
Cow position:
Alignm length: 645
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 217-554
Cow position:
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 22

Conread position: 217-771
Cow position:
Alignm length: 581
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 22

Conread position: 223-730
Cow position:
Alignm length: 534
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 511

Conread position: 223-769
Cow position:
Alignm length: 577
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 46

Conread position: 223-771
Cow position:
Alignm length: 575
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 286

Conread position: 223-773
Cow position:
Alignm length: 580
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 92

Conread position: 225-530
Cow position:
Alignm length: 312
Alignm identity: 225
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 148, 40

Conread position: 226-773
Cow position:
Alignm length: 571
Alignm identity: 366
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 119, 13

Conread position: 230-527
Cow position:
Alignm length: 317
Alignm identity: 220
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 181

Conread position: 230-630
Cow position:
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 231-618
Cow position:
Alignm length: 407
Alignm identity: 276
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 36

Conread position: 237-460
Cow position:
Alignm length: 239
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 126, 10

Conread position: 237-773
Cow position:
Alignm length: 549
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 7

Conread position: 239-772
Cow position:
Alignm length: 559
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 7

Conread position: 250-771
Cow position:
Alignm length: 548
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 462

Conread position: 263-773
Cow position:
Alignm length: 533
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 416

Conread position: 370-773
Cow position:
Alignm length: 419
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 92

Conread position: 411-773
Cow position:
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Show alignments to all cow chromosomes.