Cow genome map
| Conread name: | Thy1-THY010032D09 |
| Conread position: | 1-212 |
| Cow position: | chr10:21481031-21481240 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 78, 99 |
| Conread position: | 1-213 |
| Cow position: | chr10:14334752-14334538 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-213 |
| Cow position: | chr10:38537403-38537189 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 79, 92 |
| Conread position: | 1-213 |
| Cow position: | chr10:64146024-64146237 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 75, 118 |
| Conread position: | 1-214 |
| Cow position: | chr10:16926626-16926841 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-327 |
| Cow position: | chr10:8326225-8325905 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 1-380 |
| Cow position: | chr10:32701821-32702230 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-469 |
| Cow position: | chr10:50135663-50136169 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 338 |
| Conread position: | 1-489 |
| Cow position: | chr10:58597466-58597975 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 1-537 |
| Cow position: | chr10:57501916-57502474 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 45 |
| Conread position: | 1-576 |
| Cow position: | chr10:39180893-39181508 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 125 |
| Conread position: | 1-682 |
| Cow position: | chr10:44708515-44707791 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 57 |
| Conread position: | 1-699 |
| Cow position: | chr10:62407685-62406939 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1-700 |
| Cow position: | chr10:57988898-57988151 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 125 |
| Conread position: | 1-753 |
| Cow position: | chr10:38344263-38343469 (view UCSC Genome Browser custom track) |
| Alignm length: | 801 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 125 |
| Conread position: | 1-771 |
| Cow position: | chr10:7897389-7896566 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 63 |
| Conread position: | 1-771 |
| Cow position: | chr10:19840778-19841594 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 63 |
| Conread position: | 1-773 |
| Cow position: | chr10:16477852-16478650 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 178 |
| Conread position: | 1-773 |
| Cow position: | chr10:21488058-21488865 (view UCSC Genome Browser custom track) |
| Alignm length: | 816 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 727 |
| Conread position: | 1-773 |
| Cow position: | chr10:29845551-29844741 (view UCSC Genome Browser custom track) |
| Alignm length: | 819 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 143 |
| Conread position: | 1-773 |
| Cow position: | chr10:30684399-30683574 (view UCSC Genome Browser custom track) |
| Alignm length: | 828 |
| Alignm identity: | 582 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 1-773 |
| Cow position: | chr10:38849384-38850183 (view UCSC Genome Browser custom track) |
| Alignm length: | 808 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 53 |
| Conread position: | 1-773 |
| Cow position: | chr10:39040201-39039399 (view UCSC Genome Browser custom track) |
| Alignm length: | 815 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 107 |
| Conread position: | 1-773 |
| Cow position: | chr10:58096920-58096137 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 75 |
| Conread position: | 2-213 |
| Cow position: | chr10:2119919-2119706 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 2-224 |
| Cow position: | chr10:50313009-50313230 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 77, 162 |
| Conread position: | 7-773 |
| Cow position: | chr10:48397994-48397202 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 14 |
| Conread position: | 8-213 |
| Cow position: | chr10:11821858-11822054 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 194, 59 |
| Conread position: | 8-677 |
| Cow position: | chr10:47908037-47908748 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 7 |
| Conread position: | 8-718 |
| Cow position: | chr10:29011552-29010808 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 285 |
| Conread position: | 8-765 |
| Cow position: | chr10:29631699-29630886 (view UCSC Genome Browser custom track) |
| Alignm length: | 819 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 415 |
| Conread position: | 8-771 |
| Cow position: | chr10:57556233-57555425 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 8-773 |
| Cow position: | chr10:22583917-22583137 (view UCSC Genome Browser custom track) |
| Alignm length: | 808 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 121 |
| Conread position: | 9-412 |
| Cow position: | chr10:19512694-19513120 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 203, 48 |
| Conread position: | 9-771 |
| Cow position: | chr10:41878025-41878839 (view UCSC Genome Browser custom track) |
| Alignm length: | 816 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 6 |
| Conread position: | 32-773 |
| Cow position: | chr10:39778985-39778215 (view UCSC Genome Browser custom track) |
| Alignm length: | 779 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 77 |
| Conread position: | 33-427 |
| Cow position: | chr10:14862808-14863216 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 285 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 20, 101 |
| Conread position: | 67-771 |
| Cow position: | chr10:28946643-28947372 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 67-773 |
| Cow position: | chr10:54931035-54930307 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 340 |
| Conread position: | 80-730 |
| Cow position: | chr10:33870459-33871164 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 144-738 |
| Cow position: | chr10:21517687-21517132 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 407 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 220, 60 |
| Conread position: | 223-771 |
| Cow position: | chr10:10172071-10172650 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 229-773 |
| Cow position: | chr10:8291394-8291957 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 251 |
| Conread position: | 229-773 |
| Cow position: | chr10:37771238-37771795 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 17 |
| Conread position: | 230-669 |
| Cow position: | chr10:32317130-32317585 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 120 |
| Conread position: | 246-773 |
| Cow position: | chr10:58376933-58376387 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 54 |
| Conread position: | 251-773 |
| Cow position: | chr10:46196440-46196966 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 53 |
| Conread position: | 302-486 |
| Cow position: | chr10:36512002-36512202 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 327-768 |
| Cow position: | chr10:22909018-22908556 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 85 |
| Conread position: | 387-767 |
| Cow position: | chr10:16819733-16819347 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 16 |
Show alignments to all cow chromosomes.