Cow genome map
| Conread name: | Thy1-THY010032D09 |
| Conread position: | 1-167 |
| Cow position: | chr13:11740083-11739916 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 123 |
| Conread position: | 1-185 |
| Cow position: | chr13:34153959-34153770 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1-201 |
| Cow position: | chr13:32737021-32736821 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 75, 129 |
| Conread position: | 1-204 |
| Cow position: | chr13:12633361-12633551 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-207 |
| Cow position: | chr13:51427018-51426812 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 74, 137 |
| Conread position: | 1-225 |
| Cow position: | chr13:43982296-43982075 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 14, 76 |
| Conread position: | 1-268 |
| Cow position: | chr13:21602509-21602788 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 256 |
| Conread position: | 1-393 |
| Cow position: | chr13:30654577-30654167 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 60 |
| Conread position: | 1-412 |
| Cow position: | chr13:15923577-15923132 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 125 |
| Conread position: | 1-469 |
| Cow position: | chr13:32546193-32546692 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 7 |
| Conread position: | 1-575 |
| Cow position: | chr13:25692484-25693092 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 1-600 |
| Cow position: | chr13:17330959-17330339 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 147 |
| Conread position: | 1-682 |
| Cow position: | chr13:30278418-30279093 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 123 |
| Conread position: | 1-684 |
| Cow position: | chr13:31733086-31732360 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 31 |
| Conread position: | 1-700 |
| Cow position: | chr13:3653517-3652757 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-762 |
| Cow position: | chr13:5628014-5627243 (view UCSC Genome Browser custom track) |
| Alignm length: | 802 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 80 |
| Conread position: | 1-771 |
| Cow position: | chr13:13325731-13326545 (view UCSC Genome Browser custom track) |
| Alignm length: | 822 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 126 |
| Conread position: | 1-771 |
| Cow position: | chr13:32984541-32983722 (view UCSC Genome Browser custom track) |
| Alignm length: | 821 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 132 |
| Conread position: | 1-773 |
| Cow position: | chr13:4942186-4943009 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 47 |
| Conread position: | 1-773 |
| Cow position: | chr13:6667330-6666515 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 53 |
| Conread position: | 1-773 |
| Cow position: | chr13:9045572-9046372 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 576 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 60 |
| Conread position: | 1-773 |
| Cow position: | chr13:13900670-13901488 (view UCSC Genome Browser custom track) |
| Alignm length: | 822 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 499 |
| Conread position: | 1-773 |
| Cow position: | chr13:31611505-31610693 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 125 |
| Conread position: | 1-773 |
| Cow position: | chr13:35758085-35758902 (view UCSC Genome Browser custom track) |
| Alignm length: | 822 |
| Alignm identity: | 587 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 156 |
| Conread position: | 1-773 |
| Cow position: | chr13:43590134-43590930 (view UCSC Genome Browser custom track) |
| Alignm length: | 819 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 38 |
| Conread position: | 2-249 |
| Cow position: | chr13:1592351-1592095 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 2-443 |
| Cow position: | chr13:23002203-23001726 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 53 |
| Conread position: | 3-428 |
| Cow position: | chr13:15519702-15519260 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 318 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 78, 112 |
| Conread position: | 3-592 |
| Cow position: | chr13:15543345-15543975 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 22 |
| Conread position: | 4-170 |
| Cow position: | chr13:23405838-23405675 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 7-771 |
| Cow position: | chr13:14178030-14177243 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 114 |
| Conread position: | 8-175 |
| Cow position: | chr13:6758784-6758953 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 150 |
| Conread position: | 8-730 |
| Cow position: | chr13:21839391-21838626 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 7 |
| Conread position: | 8-735 |
| Cow position: | chr13:678561-679336 (view UCSC Genome Browser custom track) |
| Alignm length: | 783 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 10-773 |
| Cow position: | chr13:48358455-48359249 (view UCSC Genome Browser custom track) |
| Alignm length: | 814 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 108 |
| Conread position: | 17-773 |
| Cow position: | chr13:31730077-31729282 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 473 |
| Conread position: | 74-586 |
| Cow position: | chr13:49974541-49975094 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 509 |
| Conread position: | 125-773 |
| Cow position: | chr13:26845214-26845841 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 99 |
| Conread position: | 148-773 |
| Cow position: | chr13:33335329-33334697 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 91 |
| Conread position: | 204-630 |
| Cow position: | chr13:60468456-60468904 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 13 |
| Conread position: | 223-684 |
| Cow position: | chr13:42217637-42217147 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 223-773 |
| Cow position: | chr13:5500954-5500375 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 252-720 |
| Cow position: | chr13:21697341-21697835 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 54 |
| Conread position: | 253-771 |
| Cow position: | chr13:50193318-50192776 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 237 |
| Conread position: | 362-773 |
| Cow position: | chr13:49494980-49494555 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 309 |
Show alignments to all cow chromosomes.