Cow genome map

Conread name: Thy1-THY010032D09

Conread position: 1-188
Cow position: chr14:33674091-33674275 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-213
Cow position: chr14:32447469-32447682 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 1-232
Cow position: chr14:11561352-11561114 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 74, 187

Conread position: 1-297
Cow position: chr14:12742391-12742069 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 1-337
Cow position: chr14:46529900-46530248 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 7

Conread position: 1-338
Cow position: chr14:13620465-13620103 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 325

Conread position: 1-347
Cow position: chr14:9100043-9099686 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 1-349
Cow position: chr14:37984263-37984632 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 214, 0

Conread position: 1-358
Cow position: chr14:10047149-10046793 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 235
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 94, 119

Conread position: 1-363
Cow position: chr14:29705737-29706101 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 244
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 56

Conread position: 1-537
Cow position: chr14:16272615-16272040 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 128

Conread position: 1-724
Cow position: chr14:38147686-38148439 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 13

Conread position: 1-729
Cow position: chr14:29224395-29223625 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 39

Conread position: 1-741
Cow position: chr14:16919040-16918259 (view UCSC Genome Browser custom track)
Alignm length: 793
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 20

Conread position: 1-761
Cow position: chr14:17760203-17759412 (view UCSC Genome Browser custom track)
Alignm length: 803
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 38

Conread position: 1-771
Cow position: chr14:1659132-1659952 (view UCSC Genome Browser custom track)
Alignm length: 824
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 63

Conread position: 1-771
Cow position: chr14:46466371-46467154 (view UCSC Genome Browser custom track)
Alignm length: 807
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 55

Conread position: 1-772
Cow position: chr14:48825964-48826768 (view UCSC Genome Browser custom track)
Alignm length: 813
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 328

Conread position: 1-773
Cow position: chr14:13303648-13304455 (view UCSC Genome Browser custom track)
Alignm length: 821
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 54

Conread position: 1-773
Cow position: chr14:17000382-16999552 (view UCSC Genome Browser custom track)
Alignm length: 831
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 1-773
Cow position: chr14:22030768-22029953 (view UCSC Genome Browser custom track)
Alignm length: 820
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 325

Conread position: 1-773
Cow position: chr14:29580843-29581620 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 86

Conread position: 1-773
Cow position: chr14:37224868-37225655 (view UCSC Genome Browser custom track)
Alignm length: 793
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 256

Conread position: 1-773
Cow position: chr14:44775361-44774575 (view UCSC Genome Browser custom track)
Alignm length: 811
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 116

Conread position: 1-773
Cow position: chr14:48253635-48252828 (view UCSC Genome Browser custom track)
Alignm length: 817
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 362

Conread position: 2-309
Cow position: chr14:12899775-12900106 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 78, 126

Conread position: 2-497
Cow position: chr14:44689748-44690280 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 2-773
Cow position: chr14:19327584-19326763 (view UCSC Genome Browser custom track)
Alignm length: 822
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 3-773
Cow position: chr14:5074645-5075435 (view UCSC Genome Browser custom track)
Alignm length: 823
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 58

Conread position: 5-727
Cow position: chr14:23823656-23822938 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 469
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 76, 51

Conread position: 8-447
Cow position: chr14:46391846-46391384 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 7

Conread position: 8-577
Cow position: chr14:10147559-10148170 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 8-771
Cow position: chr14:2294975-2295765 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 7

Conread position: 8-771
Cow position: chr14:45671361-45670534 (view UCSC Genome Browser custom track)
Alignm length: 831
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 8-773
Cow position: chr14:45711038-45710239 (view UCSC Genome Browser custom track)
Alignm length: 810
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 18

Conread position: 8-773
Cow position: chr14:48601654-48600854 (view UCSC Genome Browser custom track)
Alignm length: 807
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 140

Conread position: 24-586
Cow position: chr14:27990894-27990324 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 268

Conread position: 36-773
Cow position: chr14:44552563-44553327 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 269

Conread position: 96-663
Cow position: chr14:34042260-34041704 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 237

Conread position: 126-771
Cow position: chr14:23256551-23255864 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 179

Conread position: 137-769
Cow position: chr14:13579208-13579852 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 187

Conread position: 239-700
Cow position: chr14:15274900-15274415 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 232

Conread position: 254-705
Cow position: chr14:35364876-35364422 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 314
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 109, 57

Conread position: 257-771
Cow position: chr14:2287224-2287762 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 237

Conread position: 258-681
Cow position: chr14:11561819-11562245 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 27

Conread position: 268-699
Cow position: chr14:49217093-49217536 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 36

Conread position: 286-771
Cow position: chr14:16342901-16342404 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 72

Conread position: 307-600
Cow position: chr14:9521708-9521402 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 57, 250

Conread position: 355-690
Cow position: chr14:35930661-35931002 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 119

Show alignments to all cow chromosomes.