Cow genome map
| Conread name: | Thy1-THY010032D09 |
| Conread position: | 1-207 |
| Cow position: | chr17:1881007-1881216 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-213 |
| Cow position: | chr17:36800-37013 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 61, 47 |
| Conread position: | 1-224 |
| Cow position: | chr17:31533119-31533341 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 75, 97 |
| Conread position: | 1-302 |
| Cow position: | chr17:4783945-4783626 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 1-448 |
| Cow position: | chr17:6120622-6121095 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 444 |
| Conread position: | 1-469 |
| Cow position: | chr17:19020478-19020975 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 329 |
| Conread position: | 1-480 |
| Cow position: | chr17:13695222-13694758 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 338 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 194, 62 |
| Conread position: | 1-521 |
| Cow position: | chr17:22558878-22559425 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 1-574 |
| Cow position: | chr17:2580529-2581144 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 331 |
| Conread position: | 1-592 |
| Cow position: | chr17:150988-150374 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 332 |
| Conread position: | 1-630 |
| Cow position: | chr17:1656942-1656301 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 129 |
| Conread position: | 1-760 |
| Cow position: | chr17:3707869-3707086 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 70 |
| Conread position: | 1-773 |
| Cow position: | chr17:15372136-15372934 (view UCSC Genome Browser custom track) |
| Alignm length: | 811 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 23 |
| Conread position: | 1-773 |
| Cow position: | chr17:20086846-20086046 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 59 |
| Conread position: | 1-773 |
| Cow position: | chr17:20403337-20404145 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 129 |
| Conread position: | 1-773 |
| Cow position: | chr17:24029096-24028276 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 732 |
| Conread position: | 1-773 |
| Cow position: | chr17:40805717-40806536 (view UCSC Genome Browser custom track) |
| Alignm length: | 824 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 125 |
| Conread position: | 2-213 |
| Cow position: | chr17:14895083-14895293 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 2-558 |
| Cow position: | chr17:239257-239809 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 3-730 |
| Cow position: | chr17:7942151-7941399 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 99 |
| Conread position: | 5-586 |
| Cow position: | chr17:39453031-39453628 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 379 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 70, 242 |
| Conread position: | 5-774 |
| Cow position: | chr17:15851599-15852423 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 8-213 |
| Cow position: | chr17:22133121-22133319 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 70, 79 |
| Conread position: | 8-274 |
| Cow position: | chr17:11689370-11689651 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 157 |
| Conread position: | 8-412 |
| Cow position: | chr17:20390171-20389733 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 8-739 |
| Cow position: | chr17:5227544-5228317 (view UCSC Genome Browser custom track) |
| Alignm length: | 783 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 8-771 |
| Cow position: | chr17:14216113-14215321 (view UCSC Genome Browser custom track) |
| Alignm length: | 815 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 7 |
| Conread position: | 8-773 |
| Cow position: | chr17:6260774-6261588 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 583 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 470 |
| Conread position: | 9-729 |
| Cow position: | chr17:1787024-1786285 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 187 |
| Conread position: | 10-406 |
| Cow position: | chr17:4941800-4941385 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 260 |
| Conread position: | 11-773 |
| Cow position: | chr17:19267911-19267116 (view UCSC Genome Browser custom track) |
| Alignm length: | 804 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 450 |
| Conread position: | 36-771 |
| Cow position: | chr17:182517-183298 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 552 |
| Conread position: | 43-468 |
| Cow position: | chr17:17067195-17067639 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 116 |
| Conread position: | 65-517 |
| Cow position: | chr17:33284863-33284389 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 265 |
| Conread position: | 73-771 |
| Cow position: | chr17:39049195-39049944 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 10 |
| Conread position: | 130-599 |
| Cow position: | chr17:23038618-23039110 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 186-771 |
| Cow position: | chr17:2263259-2263866 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 82 |
| Conread position: | 224-538 |
| Cow position: | chr17:31534017-31534336 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 54 |
| Conread position: | 229-771 |
| Cow position: | chr17:2246923-2246359 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 308-771 |
| Cow position: | chr17:13967165-13967653 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 247 |
| Conread position: | 328-513 |
| Cow position: | chr17:3235258-3235443 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 44 |
Show alignments to all cow chromosomes.