Cow genome map
Conread name: | Thy1-THY010032D09 |
Conread position: | 1-172 |
Cow position: | chr2:10268098-10267930 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 125 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 79, 125 |
Conread position: | 1-201 |
Cow position: | chr2:2451754-2451951 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 147 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 75, 98 |
Conread position: | 1-206 |
Cow position: | chr2:282127-281922 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 143 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-213 |
Cow position: | chr2:36980942-36981155 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 159 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 46, 136 |
Conread position: | 1-325 |
Cow position: | chr2:24147425-24147768 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 245 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 79, 165 |
Conread position: | 1-334 |
Cow position: | chr2:54840494-54840847 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 239 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 81, 112 |
Conread position: | 1-366 |
Cow position: | chr2:53330324-53330717 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 331 |
Conread position: | 1-466 |
Cow position: | chr2:40453474-40453960 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 108 |
Conread position: | 1-519 |
Cow position: | chr2:74857783-74858287 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 347 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 78, 13 |
Conread position: | 1-589 |
Cow position: | chr2:289218-288594 (view UCSC Genome Browser custom track) |
Alignm length: | 626 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 348 |
Conread position: | 1-614 |
Cow position: | chr2:44649843-44650468 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 34 |
Conread position: | 1-665 |
Cow position: | chr2:36277829-36277147 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 118 |
Conread position: | 1-693 |
Cow position: | chr2:33088681-33089363 (view UCSC Genome Browser custom track) |
Alignm length: | 716 |
Alignm identity: | 497 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 106 |
Conread position: | 1-694 |
Cow position: | chr2:11693049-11693775 (view UCSC Genome Browser custom track) |
Alignm length: | 735 |
Alignm identity: | 486 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 50 |
Conread position: | 1-727 |
Cow position: | chr2:43961257-43962009 (view UCSC Genome Browser custom track) |
Alignm length: | 770 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 13 |
Conread position: | 1-729 |
Cow position: | chr2:72187910-72187156 (view UCSC Genome Browser custom track) |
Alignm length: | 779 |
Alignm identity: | 531 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 75 |
Conread position: | 1-730 |
Cow position: | chr2:57336107-57336889 (view UCSC Genome Browser custom track) |
Alignm length: | 784 |
Alignm identity: | 542 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 63 |
Conread position: | 1-733 |
Cow position: | chr2:50323704-50324423 (view UCSC Genome Browser custom track) |
Alignm length: | 766 |
Alignm identity: | 509 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 168 |
Conread position: | 1-736 |
Cow position: | chr2:47622061-47621295 (view UCSC Genome Browser custom track) |
Alignm length: | 788 |
Alignm identity: | 528 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 14 |
Conread position: | 1-771 |
Cow position: | chr2:9908476-9909306 (view UCSC Genome Browser custom track) |
Alignm length: | 832 |
Alignm identity: | 563 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 63 |
Conread position: | 1-771 |
Cow position: | chr2:9958505-9957690 (view UCSC Genome Browser custom track) |
Alignm length: | 824 |
Alignm identity: | 565 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 58 |
Conread position: | 1-771 |
Cow position: | chr2:54738053-54738869 (view UCSC Genome Browser custom track) |
Alignm length: | 820 |
Alignm identity: | 559 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 154 |
Conread position: | 1-771 |
Cow position: | chr2:65937676-65936845 (view UCSC Genome Browser custom track) |
Alignm length: | 834 |
Alignm identity: | 572 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 517 |
Conread position: | 1-773 |
Cow position: | chr2:3789281-3788507 (view UCSC Genome Browser custom track) |
Alignm length: | 818 |
Alignm identity: | 566 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 55 |
Conread position: | 1-773 |
Cow position: | chr2:6962081-6962896 (view UCSC Genome Browser custom track) |
Alignm length: | 824 |
Alignm identity: | 559 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 47 |
Conread position: | 1-773 |
Cow position: | chr2:13045151-13044323 (view UCSC Genome Browser custom track) |
Alignm length: | 829 |
Alignm identity: | 574 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 1-773 |
Cow position: | chr2:16900821-16901637 (view UCSC Genome Browser custom track) |
Alignm length: | 820 |
Alignm identity: | 583 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 750 |
Conread position: | 1-773 |
Cow position: | chr2:24925127-24925950 (view UCSC Genome Browser custom track) |
Alignm length: | 827 |
Alignm identity: | 567 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 508 |
Conread position: | 1-773 |
Cow position: | chr2:25887980-25887165 (view UCSC Genome Browser custom track) |
Alignm length: | 820 |
Alignm identity: | 551 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 26 |
Conread position: | 1-773 |
Cow position: | chr2:28649036-28648224 (view UCSC Genome Browser custom track) |
Alignm length: | 818 |
Alignm identity: | 560 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 112 |
Conread position: | 1-773 |
Cow position: | chr2:47811410-47812234 (view UCSC Genome Browser custom track) |
Alignm length: | 828 |
Alignm identity: | 571 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 524 |
Conread position: | 1-773 |
Cow position: | chr2:74494267-74493469 (view UCSC Genome Browser custom track) |
Alignm length: | 816 |
Alignm identity: | 499 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 168, 80 |
Conread position: | 2-469 |
Cow position: | chr2:211696-211218 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 239 |
Conread position: | 3-207 |
Cow position: | chr2:19011917-19012124 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 153 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 3-719 |
Cow position: | chr2:35356582-35357315 (view UCSC Genome Browser custom track) |
Alignm length: | 765 |
Alignm identity: | 543 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 95 |
Conread position: | 4-366 |
Cow position: | chr2:12516620-12516254 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 258 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 76, 44 |
Conread position: | 5-225 |
Cow position: | chr2:6751137-6750917 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 167 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 74, 196 |
Conread position: | 5-327 |
Cow position: | chr2:5889078-5888741 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 225 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 83, 58 |
Conread position: | 5-530 |
Cow position: | chr2:31662645-31663193 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 356 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 72, 39 |
Conread position: | 6-340 |
Cow position: | chr2:32372820-32372469 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 250 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 74, 50 |
Conread position: | 6-612 |
Cow position: | chr2:42332319-42331668 (view UCSC Genome Browser custom track) |
Alignm length: | 658 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 8 |
Conread position: | 8-321 |
Cow position: | chr2:22078358-22078689 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 241 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 72, 102 |
Conread position: | 8-676 |
Cow position: | chr2:55483578-55482873 (view UCSC Genome Browser custom track) |
Alignm length: | 715 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 110 |
Conread position: | 8-697 |
Cow position: | chr2:904880-905571 (view UCSC Genome Browser custom track) |
Alignm length: | 720 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 50 |
Conread position: | 8-770 |
Cow position: | chr2:16282917-16283673 (view UCSC Genome Browser custom track) |
Alignm length: | 797 |
Alignm identity: | 544 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 44 |
Conread position: | 8-771 |
Cow position: | chr2:26905183-26904393 (view UCSC Genome Browser custom track) |
Alignm length: | 808 |
Alignm identity: | 540 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 17 |
Conread position: | 8-771 |
Cow position: | chr2:39422193-39423006 (view UCSC Genome Browser custom track) |
Alignm length: | 817 |
Alignm identity: | 562 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 17 |
Conread position: | 8-773 |
Cow position: | chr2:44934404-44933622 (view UCSC Genome Browser custom track) |
Alignm length: | 803 |
Alignm identity: | 542 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 16 |
Conread position: | 8-774 |
Cow position: | chr2:25028722-25027920 (view UCSC Genome Browser custom track) |
Alignm length: | 807 |
Alignm identity: | 570 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 7 |
Conread position: | 9-769 |
Cow position: | chr2:26921996-26922808 (view UCSC Genome Browser custom track) |
Alignm length: | 814 |
Alignm identity: | 550 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 55 |
Conread position: | 10-213 |
Cow position: | chr2:51998348-51998148 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 150 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 70, 94 |
Conread position: | 26-302 |
Cow position: | chr2:37789319-37789031 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 210 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 42, 38 |
Conread position: | 45-730 |
Cow position: | chr2:41687376-41688109 (view UCSC Genome Browser custom track) |
Alignm length: | 735 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 566 |
Conread position: | 48-524 |
Cow position: | chr2:49628387-49628905 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 33 |
Conread position: | 48-773 |
Cow position: | chr2:12223665-12222893 (view UCSC Genome Browser custom track) |
Alignm length: | 774 |
Alignm identity: | 526 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 220 |
Conread position: | 104-773 |
Cow position: | chr2:32458373-32457675 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 8 |
Conread position: | 150-424 |
Cow position: | chr2:36076515-36076233 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 202 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 47, 70 |
Conread position: | 150-771 |
Cow position: | chr2:14210085-14209440 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 66 |
Conread position: | 196-469 |
Cow position: | chr2:5869569-5869288 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 198 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 43, 120 |
Conread position: | 204-771 |
Cow position: | chr2:6006052-6005466 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 39 |
Conread position: | 209-590 |
Cow position: | chr2:16291484-16291880 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 41 |
Conread position: | 209-773 |
Cow position: | chr2:45938884-45938318 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 8 |
Conread position: | 223-773 |
Cow position: | chr2:47526555-47525984 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 105 |
Conread position: | 229-528 |
Cow position: | chr2:72548072-72547772 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 212 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 13, 96 |
Conread position: | 230-489 |
Cow position: | chr2:41154629-41154910 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 197 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 7, 116 |
Conread position: | 231-773 |
Cow position: | chr2:32065221-32064661 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 496 |
Conread position: | 234-771 |
Cow position: | chr2:51618078-51618620 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 13 |
Conread position: | 241-773 |
Cow position: | chr2:7326525-7327077 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 344 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 40, 31 |
Conread position: | 247-773 |
Cow position: | chr2:24926252-24926799 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 21 |
Conread position: | 255-507 |
Cow position: | chr2:17424700-17424970 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 195 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 307-503 |
Cow position: | chr2:31706578-31706375 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 148 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 315-618 |
Cow position: | chr2:2206910-2206597 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 207 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 27, 13 |
Conread position: | 320-773 |
Cow position: | chr2:14823955-14824412 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 213 |
Conread position: | 382-773 |
Cow position: | chr2:37789031-37788639 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 302 |
Conread position: | 422-770 |
Cow position: | chr2:48815306-48815649 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 89 |
Show alignments to all cow chromosomes.