Cow genome map
| Conread name: | Thy1-THY010032D09 |
| Conread position: | 1-175 |
| Cow position: | chr22:38176118-38176288 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 74, 119 |
| Conread position: | 1-207 |
| Cow position: | chr22:19142665-19142462 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 79, 24 |
| Conread position: | 1-213 |
| Cow position: | chr22:9045155-9045364 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 57, 66 |
| Conread position: | 1-360 |
| Cow position: | chr22:24536782-24537164 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 79 |
| Conread position: | 1-395 |
| Cow position: | chr22:40378748-40379158 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 299 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 81, 21 |
| Conread position: | 1-491 |
| Cow position: | chr22:6502116-6501590 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 118 |
| Conread position: | 1-518 |
| Cow position: | chr22:284049-283532 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 279 |
| Conread position: | 1-552 |
| Cow position: | chr22:36184783-36185368 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 60 |
| Conread position: | 1-581 |
| Cow position: | chr22:45581948-45582553 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 58 |
| Conread position: | 1-588 |
| Cow position: | chr22:3305555-3304952 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 135 |
| Conread position: | 1-595 |
| Cow position: | chr22:44606654-44606044 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 336 |
| Conread position: | 1-599 |
| Cow position: | chr22:12730665-12730032 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 122 |
| Conread position: | 1-665 |
| Cow position: | chr22:6332732-6333446 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 63 |
| Conread position: | 1-715 |
| Cow position: | chr22:17327434-17326673 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 273 |
| Conread position: | 1-727 |
| Cow position: | chr22:10908812-10908039 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 63 |
| Conread position: | 1-730 |
| Cow position: | chr22:1281704-1280934 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 167 |
| Conread position: | 1-765 |
| Cow position: | chr22:13773557-13774350 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 168 |
| Conread position: | 1-771 |
| Cow position: | chr22:30677661-30676872 (view UCSC Genome Browser custom track) |
| Alignm length: | 799 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 63 |
| Conread position: | 1-773 |
| Cow position: | chr22:96321-95560 (view UCSC Genome Browser custom track) |
| Alignm length: | 796 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 56 |
| Conread position: | 1-773 |
| Cow position: | chr22:1519999-1519189 (view UCSC Genome Browser custom track) |
| Alignm length: | 821 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 293 |
| Conread position: | 1-773 |
| Cow position: | chr22:3803208-3804024 (view UCSC Genome Browser custom track) |
| Alignm length: | 827 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 132 |
| Conread position: | 1-773 |
| Cow position: | chr22:37292642-37291833 (view UCSC Genome Browser custom track) |
| Alignm length: | 811 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 122 |
| Conread position: | 1-773 |
| Cow position: | chr22:39468496-39467672 (view UCSC Genome Browser custom track) |
| Alignm length: | 827 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 161 |
| Conread position: | 1-773 |
| Cow position: | chr22:44934992-44935805 (view UCSC Genome Browser custom track) |
| Alignm length: | 816 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 304 |
| Conread position: | 1-774 |
| Cow position: | chr22:694644-695463 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 63 |
| Conread position: | 2-175 |
| Cow position: | chr22:15312927-15312752 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 109 |
| Conread position: | 4-535 |
| Cow position: | chr22:18815340-18814767 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 7-773 |
| Cow position: | chr22:42992202-42993014 (view UCSC Genome Browser custom track) |
| Alignm length: | 816 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 632 |
| Conread position: | 8-297 |
| Cow position: | chr22:1323236-1323547 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 8-771 |
| Cow position: | chr22:3277329-3276515 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 7 |
| Conread position: | 8-773 |
| Cow position: | chr22:36860510-36859705 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 317 |
| Conread position: | 10-213 |
| Cow position: | chr22:11032779-11032987 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 24-773 |
| Cow position: | chr22:31334002-31333207 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 728 |
| Conread position: | 41-701 |
| Cow position: | chr22:21195429-21194725 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 48-750 |
| Cow position: | chr22:23801130-23800423 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 88-560 |
| Cow position: | chr22:24951667-24952180 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 10 |
| Conread position: | 127-717 |
| Cow position: | chr22:44348705-44348076 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 357 |
| Conread position: | 127-773 |
| Cow position: | chr22:46585415-46584724 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 146-678 |
| Cow position: | chr22:19243571-19244123 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 201-473 |
| Cow position: | chr22:40370714-40371006 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 209-773 |
| Cow position: | chr22:29012006-29011434 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 8 |
| Conread position: | 223-771 |
| Cow position: | chr22:296719-297288 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 223-773 |
| Cow position: | chr22:8664693-8664146 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 230-773 |
| Cow position: | chr22:15852699-15853263 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 69 |
| Conread position: | 231-486 |
| Cow position: | chr22:44458226-44458496 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 133, 15 |
| Conread position: | 231-773 |
| Cow position: | chr22:30128861-30129420 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 542 |
| Conread position: | 231-773 |
| Cow position: | chr22:30146510-30147069 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 542 |
| Conread position: | 253-773 |
| Cow position: | chr22:13766664-13767206 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 212 |
| Conread position: | 362-773 |
| Cow position: | chr22:30653934-30654373 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 305 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 28, 174 |
| Conread position: | 403-773 |
| Cow position: | chr22:29037135-29037504 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 197, 61 |
Show alignments to all cow chromosomes.