Cow genome map


           Conread name:
           Thy1-THY010032D09
        

               Conread position:
               1-175
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               74, 119
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               57, 66
               

               Conread position:
               1-360
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 79
               

               Conread position:
               1-395
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               299
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               81, 21
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 118
               

               Conread position:
               1-518
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 279
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               1-581
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 58
               

               Conread position:
               1-588
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 135
               

               Conread position:
               1-595
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 336
               

               Conread position:
               1-599
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 122
               

               Conread position:
               1-665
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 63
               

               Conread position:
               1-715
               

               Cow position:
               
               

               Alignm length:
               764
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 273
               

               Conread position:
               1-727
               

               Cow position:
               
               

               Alignm length:
               778
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 63
               

               Conread position:
               1-730
               

               Cow position:
               
               

               Alignm length:
               780
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 167
               

               Conread position:
               1-765
               

               Cow position:
               
               

               Alignm length:
               798
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 168
               

               Conread position:
               1-771
               

               Cow position:
               
               

               Alignm length:
               799
               

               Alignm identity:
               547
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 63
               

               Conread position:
               1-773
               

               Cow position:
               
               

               Alignm length:
               796
               

               Alignm identity:
               547
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 56
               

               Conread position:
               1-773
               

               Cow position:
               
               

               Alignm length:
               821
               

               Alignm identity:
               558
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 293
               

               Conread position:
               1-773
               

               Cow position:
               
               

               Alignm length:
               827
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 132
               

               Conread position:
               1-773
               

               Cow position:
               
               

               Alignm length:
               811
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 122
               

               Conread position:
               1-773
               

               Cow position:
               
               

               Alignm length:
               827
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 161
               

               Conread position:
               1-773
               

               Cow position:
               
               

               Alignm length:
               816
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 304
               

               Conread position:
               1-774
               

               Cow position:
               
               

               Alignm length:
               823
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 63
               

               Conread position:
               2-175
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 109
               

               Conread position:
               4-535
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               7-773
               

               Cow position:
               
               

               Alignm length:
               816
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 632
               

               Conread position:
               8-297
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               8-771
               

               Cow position:
               
               

               Alignm length:
               818
               

               Alignm identity:
               567
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 7
               

               Conread position:
               8-773
               

               Cow position:
               
               

               Alignm length:
               818
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 317
               

               Conread position:
               10-213
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               24-773
               

               Cow position:
               
               

               Alignm length:
               798
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 728
               

               Conread position:
               41-701
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               48-750
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 52
               

               Conread position:
               88-560
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 10
               

               Conread position:
               127-717
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 357
               

               Conread position:
               127-773
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               146-678
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 39
               

               Conread position:
               201-473
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               30, 67
               

               Conread position:
               209-773
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 8
               

               Conread position:
               223-771
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               223-773
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               230-773
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 69
               

               Conread position:
               231-486
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               133, 15
               

               Conread position:
               231-773
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 542
               

               Conread position:
               231-773
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 542
               

               Conread position:
               253-773
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 212
               

               Conread position:
               362-773
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               305
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               28, 174
               

               Conread position:
               403-773
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               197, 61
               
Show alignments to all cow chromosomes.