Cow genome map
| Conread name: | Thy1-THY010032D09 |
| Conread position: | 1-205 |
| Cow position: | chr29:36597543-36597342 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 1-207 |
| Cow position: | chr29:45205534-45205741 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 79, 126 |
| Conread position: | 1-213 |
| Cow position: | chr29:8774279-8774068 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 85, 102 |
| Conread position: | 1-213 |
| Cow position: | chr29:14210535-14210323 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 79, 165 |
| Conread position: | 1-307 |
| Cow position: | chr29:9620451-9620760 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 120 |
| Conread position: | 1-440 |
| Cow position: | chr29:10647215-10646740 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-451 |
| Cow position: | chr29:251780-252256 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 271 |
| Conread position: | 1-469 |
| Cow position: | chr29:10849787-10850273 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 137 |
| Conread position: | 1-505 |
| Cow position: | chr29:21425990-21425447 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 13 |
| Conread position: | 1-534 |
| Cow position: | chr29:34525276-34525823 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 135 |
| Conread position: | 1-538 |
| Cow position: | chr29:38237488-38236924 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 387 |
| Conread position: | 1-574 |
| Cow position: | chr29:2747402-2746816 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 122 |
| Conread position: | 1-754 |
| Cow position: | chr29:23977158-23977957 (view UCSC Genome Browser custom track) |
| Alignm length: | 801 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 101 |
| Conread position: | 1-773 |
| Cow position: | chr29:2100885-2101691 (view UCSC Genome Browser custom track) |
| Alignm length: | 808 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 126 |
| Conread position: | 1-773 |
| Cow position: | chr29:3176386-3175604 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 203 |
| Conread position: | 1-773 |
| Cow position: | chr29:5981681-5980858 (view UCSC Genome Browser custom track) |
| Alignm length: | 836 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 134 |
| Conread position: | 1-773 |
| Cow position: | chr29:19622248-19621414 (view UCSC Genome Browser custom track) |
| Alignm length: | 835 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-773 |
| Cow position: | chr29:19654662-19655471 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 126 |
| Conread position: | 1-773 |
| Cow position: | chr29:20252201-20253022 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 396 |
| Conread position: | 1-773 |
| Cow position: | chr29:26163799-26162983 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 125 |
| Conread position: | 1-773 |
| Cow position: | chr29:32541128-32541948 (view UCSC Genome Browser custom track) |
| Alignm length: | 822 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 61 |
| Conread position: | 1-773 |
| Cow position: | chr29:32891820-32892620 (view UCSC Genome Browser custom track) |
| Alignm length: | 815 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 315 |
| Conread position: | 1-773 |
| Cow position: | chr29:34798775-34797958 (view UCSC Genome Browser custom track) |
| Alignm length: | 821 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 63 |
| Conread position: | 1-773 |
| Cow position: | chr29:37165168-37165920 (view UCSC Genome Browser custom track) |
| Alignm length: | 789 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 118 |
| Conread position: | 1-773 |
| Cow position: | chr29:38228012-38228828 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 609 |
| Conread position: | 1-773 |
| Cow position: | chr29:39078671-39077859 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 576 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 126 |
| Conread position: | 1-774 |
| Cow position: | chr29:47404-46608 (view UCSC Genome Browser custom track) |
| Alignm length: | 802 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 256 |
| Conread position: | 1-774 |
| Cow position: | chr29:6213559-6214339 (view UCSC Genome Browser custom track) |
| Alignm length: | 806 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 28 |
| Conread position: | 3-249 |
| Cow position: | chr29:646831-647071 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 3-618 |
| Cow position: | chr29:14586959-14587612 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 121 |
| Conread position: | 8-469 |
| Cow position: | chr29:3328377-3328880 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 8-507 |
| Cow position: | chr29:18855907-18855366 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 8-590 |
| Cow position: | chr29:14085085-14084468 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 67 |
| Conread position: | 8-684 |
| Cow position: | chr29:45460775-45461510 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 14 |
| Conread position: | 8-769 |
| Cow position: | chr29:31182447-31183251 (view UCSC Genome Browser custom track) |
| Alignm length: | 809 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 9-725 |
| Cow position: | chr29:14112587-14113344 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 51 |
| Conread position: | 10-773 |
| Cow position: | chr29:8664566-8665360 (view UCSC Genome Browser custom track) |
| Alignm length: | 815 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 46 |
| Conread position: | 14-773 |
| Cow position: | chr29:25931484-25930666 (view UCSC Genome Browser custom track) |
| Alignm length: | 821 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 750 |
| Conread position: | 17-366 |
| Cow position: | chr29:45586331-45585980 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 63, 201 |
| Conread position: | 45-771 |
| Cow position: | chr29:13622782-13622007 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 156 |
| Conread position: | 66-474 |
| Cow position: | chr29:42092861-42093311 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 308 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 176-773 |
| Cow position: | chr29:32287477-32288099 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 333 |
| Conread position: | 194-773 |
| Cow position: | chr29:4633375-4632794 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 205-468 |
| Cow position: | chr29:6198492-6198213 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 156, 12 |
| Conread position: | 217-554 |
| Cow position: | chr29:29502987-29502633 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 22 |
| Conread position: | 217-771 |
| Cow position: | chr29:10023060-10022481 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 22 |
| Conread position: | 217-771 |
| Cow position: | chr29:27180481-27179902 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 22 |
| Conread position: | 224-771 |
| Cow position: | chr29:19888859-19889434 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 227-771 |
| Cow position: | chr29:21431569-21431004 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 12 |
| Conread position: | 230-773 |
| Cow position: | chr29:43324809-43325367 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 24 |
| Conread position: | 246-774 |
| Cow position: | chr29:13851573-13851024 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
Show alignments to all cow chromosomes.