Cow genome map

Conread name: Thy1-THY010032D09

Conread position: 1-126
Cow position:
Alignm length: 128
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 70

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 1-207
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 114

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 1-213
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 1-213
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 79, 0

Conread position: 1-213
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 79, 101

Conread position: 1-213
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 1-214
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 1-363
Cow position:
Alignm length: 385
Alignm identity: 254
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 60

Conread position: 1-450
Cow position:
Alignm length: 480
Alignm identity: 288
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 79, 14

Conread position: 1-483
Cow position:
Alignm length: 530
Alignm identity: 349
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 79, 0

Conread position: 1-484
Cow position:
Alignm length: 529
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 507

Conread position: 1-493
Cow position:
Alignm length: 537
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 59

Conread position: 1-582
Cow position:
Alignm length: 612
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 77

Conread position: 1-587
Cow position:
Alignm length: 633
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 63

Conread position: 1-590
Cow position:
Alignm length: 635
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 63

Conread position: 1-615
Cow position:
Alignm length: 651
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 63

Conread position: 1-770
Cow position:
Alignm length: 819
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 569

Conread position: 1-771
Cow position:
Alignm length: 812
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 53

Conread position: 1-772
Cow position:
Alignm length: 818
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 74

Conread position: 1-772
Cow position:
Alignm length: 822
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 1-773
Cow position:
Alignm length: 825
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 513

Conread position: 1-773
Cow position:
Alignm length: 820
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 126

Conread position: 1-773
Cow position:
Alignm length: 827
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 421

Conread position: 1-773
Cow position:
Alignm length: 803
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 24

Conread position: 1-773
Cow position:
Alignm length: 818
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 13

Conread position: 1-773
Cow position:
Alignm length: 812
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 327

Conread position: 1-773
Cow position:
Alignm length: 816
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 101

Conread position: 1-773
Cow position:
Alignm length: 831
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 53

Conread position: 1-773
Cow position:
Alignm length: 822
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 481

Conread position: 1-773
Cow position:
Alignm length: 827
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 329

Conread position: 1-773
Cow position:
Alignm length: 825
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 325

Conread position: 1-773
Cow position:
Alignm length: 825
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 558

Conread position: 1-773
Cow position:
Alignm length: 824
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 144

Conread position: 1-774
Cow position:
Alignm length: 815
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 13

Conread position: 5-223
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 96

Conread position: 8-207
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 8-214
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 74, 145

Conread position: 8-334
Cow position:
Alignm length: 336
Alignm identity: 231
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 72, 249

Conread position: 8-706
Cow position:
Alignm length: 738
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 13

Conread position: 8-745
Cow position:
Alignm length: 785
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 55

Conread position: 8-749
Cow position:
Alignm length: 773
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 7

Conread position: 8-770
Cow position:
Alignm length: 811
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 17

Conread position: 8-771
Cow position:
Alignm length: 808
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 8-771
Cow position:
Alignm length: 816
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 8-773
Cow position:
Alignm length: 813
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 94

Conread position: 17-213
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 62, 115

Conread position: 18-750
Cow position:
Alignm length: 784
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 35

Conread position: 31-772
Cow position:
Alignm length: 779
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 27

Conread position: 59-771
Cow position:
Alignm length: 765
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 106

Conread position: 59-771
Cow position:
Alignm length: 765
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 69

Conread position: 66-773
Cow position:
Alignm length: 757
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 66-773
Cow position:
Alignm length: 747
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 74

Conread position: 72-489
Cow position:
Alignm length: 460
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 116-682
Cow position:
Alignm length: 579
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 55

Conread position: 187-768
Cow position:
Alignm length: 610
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 69

Conread position: 203-733
Cow position:
Alignm length: 562
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 9

Conread position: 205-551
Cow position:
Alignm length: 369
Alignm identity: 254
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 37, 110

Conread position: 212-771
Cow position:
Alignm length: 587
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 5

Conread position: 215-753
Cow position:
Alignm length: 568
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 257

Conread position: 217-496
Cow position:
Alignm length: 298
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 148, 22

Conread position: 217-770
Cow position:
Alignm length: 580
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 22

Conread position: 226-576
Cow position:
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 12

Conread position: 226-614
Cow position:
Alignm length: 412
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 14

Conread position: 228-749
Cow position:
Alignm length: 546
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 18

Conread position: 230-469
Cow position:
Alignm length: 259
Alignm identity: 180
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 231-665
Cow position:
Alignm length: 459
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 20

Conread position: 235-727
Cow position:
Alignm length: 526
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 91

Conread position: 255-593
Cow position:
Alignm length: 351
Alignm identity: 237
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 98, 13

Conread position: 273-773
Cow position:
Alignm length: 527
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 5

Conread position: 291-769
Cow position:
Alignm length: 504
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 191

Conread position: 315-773
Cow position:
Alignm length: 482
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 461

Show alignments to all cow chromosomes.