Cow genome map
| Conread name: | Thy1-THY010032D09 |
| Conread position: | 1-156 |
| Cow position: | chr7:34150389-34150543 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 79, 123 |
| Conread position: | 1-200 |
| Cow position: | chr7:59466880-59466687 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 147, 60 |
| Conread position: | 1-205 |
| Cow position: | chr7:39792853-39793058 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-207 |
| Cow position: | chr7:64239921-64239713 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-213 |
| Cow position: | chr7:3156549-3156765 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 58, 119 |
| Conread position: | 1-213 |
| Cow position: | chr7:30118455-30118241 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 97 |
| Conread position: | 1-223 |
| Cow position: | chr7:65458103-65457880 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 78, 157 |
| Conread position: | 1-366 |
| Cow position: | chr7:24058530-24058907 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 61 |
| Conread position: | 1-413 |
| Cow position: | chr7:57211248-57211681 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 318 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 77, 12 |
| Conread position: | 1-488 |
| Cow position: | chr7:66905805-66906337 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 60 |
| Conread position: | 1-581 |
| Cow position: | chr7:1371561-1370943 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 257 |
| Conread position: | 1-591 |
| Cow position: | chr7:68334026-68334610 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 166 |
| Conread position: | 1-595 |
| Cow position: | chr7:25135946-25136563 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 93 |
| Conread position: | 1-614 |
| Cow position: | chr7:29368939-29368303 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 13 |
| Conread position: | 1-630 |
| Cow position: | chr7:59138730-59139366 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 18 |
| Conread position: | 1-704 |
| Cow position: | chr7:53407689-53408403 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 91 |
| Conread position: | 1-753 |
| Cow position: | chr7:10430340-10429542 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 324 |
| Conread position: | 1-769 |
| Cow position: | chr7:67676182-67676969 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 1-771 |
| Cow position: | chr7:545929-546737 (view UCSC Genome Browser custom track) |
| Alignm length: | 815 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 63 |
| Conread position: | 1-771 |
| Cow position: | chr7:21852741-21851950 (view UCSC Genome Browser custom track) |
| Alignm length: | 811 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 146 |
| Conread position: | 1-771 |
| Cow position: | chr7:27101207-27100390 (view UCSC Genome Browser custom track) |
| Alignm length: | 822 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 63 |
| Conread position: | 1-771 |
| Cow position: | chr7:52763364-52764186 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-773 |
| Cow position: | chr7:5309029-5308204 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 24 |
| Conread position: | 1-773 |
| Cow position: | chr7:13532819-13532005 (view UCSC Genome Browser custom track) |
| Alignm length: | 830 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 98 |
| Conread position: | 1-773 |
| Cow position: | chr7:14138512-14137691 (view UCSC Genome Browser custom track) |
| Alignm length: | 828 |
| Alignm identity: | 590 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 281 |
| Conread position: | 1-773 |
| Cow position: | chr7:14214283-14213484 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 134 |
| Conread position: | 1-773 |
| Cow position: | chr7:21126579-21125775 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-773 |
| Cow position: | chr7:21233925-21233107 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 329 |
| Conread position: | 1-773 |
| Cow position: | chr7:21986509-21987307 (view UCSC Genome Browser custom track) |
| Alignm length: | 810 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 114 |
| Conread position: | 1-773 |
| Cow position: | chr7:38397898-38398720 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-773 |
| Cow position: | chr7:67813589-67814377 (view UCSC Genome Browser custom track) |
| Alignm length: | 809 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 69 |
| Conread position: | 2-773 |
| Cow position: | chr7:21311537-21312343 (view UCSC Genome Browser custom track) |
| Alignm length: | 827 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 3-170 |
| Cow position: | chr7:21930222-21930391 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 3-590 |
| Cow position: | chr7:6647582-6646959 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 3-771 |
| Cow position: | chr7:33332645-33333463 (view UCSC Genome Browser custom track) |
| Alignm length: | 824 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 3-773 |
| Cow position: | chr7:67799908-67800727 (view UCSC Genome Browser custom track) |
| Alignm length: | 824 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 183 |
| Conread position: | 5-498 |
| Cow position: | chr7:45651891-45652383 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 330 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 8-213 |
| Cow position: | chr7:27606221-27606014 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 8-340 |
| Cow position: | chr7:46900992-46900623 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 8-425 |
| Cow position: | chr7:5663654-5664111 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 308 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 8-499 |
| Cow position: | chr7:24878789-24878264 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 32 |
| Conread position: | 8-730 |
| Cow position: | chr7:6721238-6722000 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 8-773 |
| Cow position: | chr7:55536836-55536022 (view UCSC Genome Browser custom track) |
| Alignm length: | 819 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 282 |
| Conread position: | 10-213 |
| Cow position: | chr7:42871236-42871441 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 69, 5 |
| Conread position: | 10-537 |
| Cow position: | chr7:26852543-26853095 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 359 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 9, 328 |
| Conread position: | 12-771 |
| Cow position: | chr7:59679946-59680747 (view UCSC Genome Browser custom track) |
| Alignm length: | 809 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 260 |
| Conread position: | 15-398 |
| Cow position: | chr7:39554396-39553987 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 281 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 8, 239 |
| Conread position: | 15-773 |
| Cow position: | chr7:24807377-24806584 (view UCSC Genome Browser custom track) |
| Alignm length: | 801 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 314 |
| Conread position: | 75-771 |
| Cow position: | chr7:54649055-54649801 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 82-576 |
| Cow position: | chr7:995923-996433 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 244 |
| Conread position: | 126-408 |
| Cow position: | chr7:34546572-34546878 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 139-435 |
| Cow position: | chr7:40320414-40320729 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 183 |
| Conread position: | 213-440 |
| Cow position: | chr7:541651-541415 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 28, 56 |
| Conread position: | 217-730 |
| Cow position: | chr7:5261592-5261062 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 17 |
| Conread position: | 217-771 |
| Cow position: | chr7:62445821-62445251 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 22 |
| Conread position: | 223-433 |
| Cow position: | chr7:4093894-4093677 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 64, 53 |
| Conread position: | 230-771 |
| Cow position: | chr7:58337698-58337146 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 98 |
| Conread position: | 237-773 |
| Cow position: | chr7:63387088-63387636 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 263-773 |
| Cow position: | chr7:65872243-65871714 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 267 |
| Conread position: | 264-770 |
| Cow position: | chr7:39132847-39133379 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 458 |
| Conread position: | 287-771 |
| Cow position: | chr7:11462749-11462238 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 315-714 |
| Cow position: | chr7:23250039-23250464 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 338-753 |
| Cow position: | chr7:33070962-33070530 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 415 |
Show alignments to all cow chromosomes.