Cow genome map

Conread name: Thy1-THY010032D09

Conread position: 1-206
Cow position: chr8:25775402-25775195 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 78, 0

Conread position: 1-207
Cow position: chr8:10742398-10742190 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 79, 0

Conread position: 1-207
Cow position: chr8:33589648-33589856 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 1-207
Cow position: chr8:50287646-50287450 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 1-213
Cow position: chr8:8308877-8309089 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 54

Conread position: 1-213
Cow position: chr8:24915065-24914848 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 1-225
Cow position: chr8:44662433-44662204 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 1-274
Cow position: chr8:12450294-12450571 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 79, 14

Conread position: 1-309
Cow position: chr8:19330983-19331313 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 79, 288

Conread position: 1-311
Cow position: chr8:49216002-49216332 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 74, 114

Conread position: 1-335
Cow position: chr8:17312299-17312660 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 79, 173

Conread position: 1-362
Cow position: chr8:38605928-38605560 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 212, 62

Conread position: 1-540
Cow position: chr8:31984396-31984982 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 94

Conread position: 1-567
Cow position: chr8:9964201-9963644 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 24

Conread position: 1-616
Cow position: chr8:19051718-19052379 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 1-676
Cow position: chr8:5017450-5018170 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 413

Conread position: 1-676
Cow position: chr8:7162167-7162889 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 62

Conread position: 1-684
Cow position: chr8:54017280-54016552 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 149

Conread position: 1-693
Cow position: chr8:39194944-39194203 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 83

Conread position: 1-731
Cow position: chr8:11525002-11525734 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 38

Conread position: 1-733
Cow position: chr8:21230352-21231141 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 355

Conread position: 1-756
Cow position: chr8:42747512-42746736 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 85

Conread position: 1-769
Cow position: chr8:1347982-1347165 (view UCSC Genome Browser custom track)
Alignm length: 821
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 20

Conread position: 1-770
Cow position: chr8:3855755-3854938 (view UCSC Genome Browser custom track)
Alignm length: 819
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 94

Conread position: 1-771
Cow position: chr8:25377252-25378062 (view UCSC Genome Browser custom track)
Alignm length: 815
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 63

Conread position: 1-771
Cow position: chr8:32436812-32435989 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 83

Conread position: 1-771
Cow position: chr8:42429000-42429757 (view UCSC Genome Browser custom track)
Alignm length: 804
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 57

Conread position: 1-773
Cow position: chr8:3785907-3786719 (view UCSC Genome Browser custom track)
Alignm length: 826
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 324

Conread position: 1-773
Cow position: chr8:4687673-4688490 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 160

Conread position: 1-773
Cow position: chr8:11803095-11803900 (view UCSC Genome Browser custom track)
Alignm length: 815
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 115

Conread position: 1-773
Cow position: chr8:29007907-29008702 (view UCSC Genome Browser custom track)
Alignm length: 809
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 314

Conread position: 1-773
Cow position: chr8:34109153-34109966 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 12

Conread position: 1-773
Cow position: chr8:34525942-34525154 (view UCSC Genome Browser custom track)
Alignm length: 802
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 39

Conread position: 1-773
Cow position: chr8:38391911-38392713 (view UCSC Genome Browser custom track)
Alignm length: 809
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 183

Conread position: 1-773
Cow position: chr8:41644404-41643597 (view UCSC Genome Browser custom track)
Alignm length: 818
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 65

Conread position: 1-773
Cow position: chr8:47075430-47076253 (view UCSC Genome Browser custom track)
Alignm length: 833
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 92

Conread position: 1-773
Cow position: chr8:50929848-50929016 (view UCSC Genome Browser custom track)
Alignm length: 835
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 327

Conread position: 1-774
Cow position: chr8:21584501-21585271 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 62

Conread position: 1-774
Cow position: chr8:23771911-23772722 (view UCSC Genome Browser custom track)
Alignm length: 817
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 552

Conread position: 3-207
Cow position: chr8:14590628-14590422 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 68, 61

Conread position: 3-617
Cow position: chr8:32041486-32040834 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 22

Conread position: 3-773
Cow position: chr8:25523674-25524481 (view UCSC Genome Browser custom track)
Alignm length: 816
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 112

Conread position: 7-440
Cow position: chr8:15409062-15409532 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 312
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 47, 338

Conread position: 7-581
Cow position: chr8:8911767-8912370 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 73

Conread position: 8-207
Cow position: chr8:25437600-25437802 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 59, 48

Conread position: 8-213
Cow position: chr8:56883800-56884005 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 192

Conread position: 8-428
Cow position: chr8:46051459-46051919 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 118

Conread position: 8-519
Cow position: chr8:37654583-37654031 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 8-616
Cow position: chr8:9736520-9737173 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 7

Conread position: 8-769
Cow position: chr8:1320321-1321102 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 7

Conread position: 8-769
Cow position: chr8:32630748-32629948 (view UCSC Genome Browser custom track)
Alignm length: 810
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 7

Conread position: 8-771
Cow position: chr8:10749642-10750434 (view UCSC Genome Browser custom track)
Alignm length: 807
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 7

Conread position: 8-771
Cow position: chr8:22571030-22570217 (view UCSC Genome Browser custom track)
Alignm length: 817
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 8-771
Cow position: chr8:34348953-34349758 (view UCSC Genome Browser custom track)
Alignm length: 809
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 17

Conread position: 9-213
Cow position: chr8:61080079-61079873 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 9-424
Cow position: chr8:22128852-22129285 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 6

Conread position: 9-773
Cow position: chr8:76317-75525 (view UCSC Genome Browser custom track)
Alignm length: 813
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 467

Conread position: 9-773
Cow position: chr8:58185304-58184529 (view UCSC Genome Browser custom track)
Alignm length: 807
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 67

Conread position: 21-771
Cow position: chr8:47887175-47887931 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 27

Conread position: 30-753
Cow position: chr8:59261629-59260879 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 482

Conread position: 31-773
Cow position: chr8:60061703-60062498 (view UCSC Genome Browser custom track)
Alignm length: 804
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 94

Conread position: 59-771
Cow position: chr8:8517266-8516512 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 47

Conread position: 77-618
Cow position: chr8:45691662-45691094 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 46

Conread position: 85-771
Cow position: chr8:37656204-37655468 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 86-773
Cow position: chr8:2235626-2234894 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 11

Conread position: 102-773
Cow position: chr8:9539318-9538629 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 123

Conread position: 127-705
Cow position: chr8:45145910-45145283 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 245

Conread position: 193-773
Cow position: chr8:42656504-42655909 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 134

Conread position: 205-606
Cow position: chr8:14631172-14630746 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 205-771
Cow position: chr8:14256571-14257167 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 213-572
Cow position: chr8:28878517-28878890 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 281

Conread position: 217-598
Cow position: chr8:23135097-23134695 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 34

Conread position: 217-676
Cow position: chr8:14255694-14256175 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 26

Conread position: 217-719
Cow position: chr8:56884046-56884564 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 28

Conread position: 217-771
Cow position: chr8:39819960-39820539 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 22

Conread position: 223-773
Cow position: chr8:44700502-44701068 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 169

Conread position: 228-772
Cow position: chr8:25775139-25774559 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 76

Conread position: 229-730
Cow position: chr8:6726462-6725942 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 19

Conread position: 234-773
Cow position: chr8:32318017-32317465 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 19

Conread position: 239-401
Cow position: chr8:48103229-48103386 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 254-773
Cow position: chr8:9639417-9639978 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 265

Conread position: 270-773
Cow position: chr8:12313856-12313314 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 214

Conread position: 281-546
Cow position: chr8:44963-44688 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 84, 9

Conread position: 286-771
Cow position: chr8:35543296-35543757 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 59

Conread position: 314-518
Cow position: chr8:39591648-39591429 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 387-676
Cow position: chr8:48103535-48103833 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 117

Conread position: 403-771
Cow position: chr8:44108855-44109232 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 334

Conread position: 415-768
Cow position: chr8:1121101-1121459 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 182, 172

Show alignments to all cow chromosomes.