Cow genome map

Conread name: Thy1-THY010033A06

Conread position: 273-930
Cow position:
Alignm length: 675
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 9

Conread position: 301-679
Cow position:
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 261

Conread position: 303-935
Cow position:
Alignm length: 651
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 34

Conread position: 308-936
Cow position:
Alignm length: 662
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 152

Conread position: 311-933
Cow position:
Alignm length: 639
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 59

Conread position: 319-434
Cow position:
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 319-522
Cow position:
Alignm length: 206
Alignm identity: 143
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 13, 19

Conread position: 319-604
Cow position:
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 221

Conread position: 319-612
Cow position:
Alignm length: 305
Alignm identity: 210
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 101, 13

Conread position: 319-612
Cow position:
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 138

Conread position: 319-681
Cow position:
Alignm length: 382
Alignm identity: 262
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 93, 22

Conread position: 319-702
Cow position:
Alignm length: 414
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 335

Conread position: 319-764
Cow position:
Alignm length: 473
Alignm identity: 310
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 168, 11

Conread position: 319-772
Cow position:
Alignm length: 495
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 363

Conread position: 319-863
Cow position:
Alignm length: 566
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 167

Conread position: 319-936
Cow position:
Alignm length: 651
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 61

Conread position: 320-531
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 58

Conread position: 320-551
Cow position:
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 320-933
Cow position:
Alignm length: 638
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 93

Conread position: 321-516
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 17

Conread position: 321-533
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 322-538
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 124

Conread position: 335-494
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 85, 19

Conread position: 335-535
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 38

Conread position: 335-551
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 122

Conread position: 336-518
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 60

Conread position: 336-518
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 82, 112

Conread position: 336-936
Cow position:
Alignm length: 630
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 8

Conread position: 337-550
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 35

Conread position: 337-551
Cow position:
Alignm length: 219
Alignm identity: 148
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 60

Conread position: 338-560
Cow position:
Alignm length: 233
Alignm identity: 174
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 71, 113

Conread position: 342-678
Cow position:
Alignm length: 348
Alignm identity: 247
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 81, 54

Conread position: 345-936
Cow position:
Alignm length: 626
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 11

Conread position: 346-700
Cow position:
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 203

Conread position: 352-932
Cow position:
Alignm length: 597
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 111

Conread position: 391-697
Cow position:
Alignm length: 310
Alignm identity: 199
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 9

Conread position: 418-794
Cow position:
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 182

Conread position: 432-768
Cow position:
Alignm length: 338
Alignm identity: 229
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 15

Conread position: 442-639
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 119, 157

Conread position: 443-726
Cow position:
Alignm length: 292
Alignm identity: 213
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 49, 108

Conread position: 453-848
Cow position:
Alignm length: 407
Alignm identity: 274
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 144, 74

Conread position: 456-702
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 122, 89

Conread position: 461-931
Cow position:
Alignm length: 491
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 65

Conread position: 462-932
Cow position:
Alignm length: 497
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 83

Conread position: 494-786
Cow position:
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 75

Conread position: 497-931
Cow position:
Alignm length: 444
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 69

Conread position: 542-931
Cow position:
Alignm length: 402
Alignm identity: 277
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 19, 99

Conread position: 545-929
Cow position:
Alignm length: 391
Alignm identity: 249
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 103

Conread position: 545-930
Cow position:
Alignm length: 405
Alignm identity: 279
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 118

Conread position: 554-932
Cow position:
Alignm length: 389
Alignm identity: 268
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 16, 41

Conread position: 555-934
Cow position:
Alignm length: 395
Alignm identity: 266
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 17, 42

Conread position: 564-931
Cow position:
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 44

Conread position: 568-923
Cow position:
Alignm length: 361
Alignm identity: 237
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 33, 26

Conread position: 570-931
Cow position:
Alignm length: 365
Alignm identity: 232
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 24

Conread position: 576-812
Cow position:
Alignm length: 243
Alignm identity: 166
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 18, 86

Conread position: 577-881
Cow position:
Alignm length: 324
Alignm identity: 226
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 112

Conread position: 579-775
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 597-921
Cow position:
Alignm length: 328
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 141, 49

Conread position: 599-913
Cow position:
Alignm length: 318
Alignm identity: 209
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 228, 52

Conread position: 601-905
Cow position:
Alignm length: 309
Alignm identity: 205
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 210, 56

Conread position: 601-921
Cow position:
Alignm length: 334
Alignm identity: 237
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 176, 54

Conread position: 602-929
Cow position:
Alignm length: 328
Alignm identity: 229
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 602-932
Cow position:
Alignm length: 333
Alignm identity: 209
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 54

Conread position: 602-936
Cow position:
Alignm length: 345
Alignm identity: 236
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 171, 35

Conread position: 603-913
Cow position:
Alignm length: 314
Alignm identity: 206
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 224, 23

Conread position: 607-933
Cow position:
Alignm length: 338
Alignm identity: 227
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 170, 29

Conread position: 608-922
Cow position:
Alignm length: 319
Alignm identity: 219
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 42

Conread position: 611-934
Cow position:
Alignm length: 344
Alignm identity: 244
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 5, 45

Conread position: 612-751
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 639-930
Cow position:
Alignm length: 305
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 67

Conread position: 649-919
Cow position:
Alignm length: 273
Alignm identity: 182
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 8, 57

Conread position: 649-919
Cow position:
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 130

Conread position: 655-933
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 50

Conread position: 655-933
Cow position:
Alignm length: 294
Alignm identity: 211
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 23, 29

Conread position: 655-936
Cow position:
Alignm length: 294
Alignm identity: 215
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 113, 28

Conread position: 661-936
Cow position:
Alignm length: 279
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 167, 43

Conread position: 665-934
Cow position:
Alignm length: 274
Alignm identity: 195
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 140, 21

Conread position: 669-930
Cow position:
Alignm length: 276
Alignm identity: 205
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 101, 35

Conread position: 669-936
Cow position:
Alignm length: 275
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 35

Conread position: 670-935
Cow position:
Alignm length: 273
Alignm identity: 198
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 86, 16

Conread position: 677-919
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 27, 61

Conread position: 694-891
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 55

Conread position: 697-880
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 102, 23

Conread position: 704-911
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 78, 31

Conread position: 705-874
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 108

Conread position: 713-935
Cow position:
Alignm length: 227
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 101

Conread position: 727-936
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 157

Conread position: 750-936
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 11

Conread position: 761-932
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 18

Conread position: 776-932
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 51, 38

Conread position: 780-934
Cow position:
Alignm length: 155
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 785-928
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 42, 25

Conread position: 785-932
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 785-936
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 26

Conread position: 795-935
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 16

Conread position: 803-936
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 812-936
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 0

Show alignments to all cow chromosomes.