Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               292-740
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 85
               

               Conread position:
               310-934
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 188
               

               Conread position:
               312-540
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               6, 34
               

               Conread position:
               314-641
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 310
               

               Conread position:
               314-918
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               315-531
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               319-483
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               98, 89
               

               Conread position:
               319-740
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 234
               

               Conread position:
               319-757
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 95
               

               Conread position:
               319-865
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 88
               

               Conread position:
               319-914
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 183
               

               Conread position:
               319-931
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 26
               

               Conread position:
               319-931
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 120
               

               Conread position:
               319-935
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               320-452
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               320-502
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               96, 51
               

               Conread position:
               320-518
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               320-528
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               94, 125
               

               Conread position:
               320-543
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               320-871
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 138
               

               Conread position:
               320-885
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 10
               

               Conread position:
               320-932
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 80
               

               Conread position:
               321-543
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               95, 12
               

               Conread position:
               321-574
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 52
               

               Conread position:
               321-579
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               198, 76
               

               Conread position:
               321-586
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               100, 38
               

               Conread position:
               322-920
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 135
               

               Conread position:
               326-560
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               92, 45
               

               Conread position:
               329-518
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               89, 23
               

               Conread position:
               330-935
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 63
               

               Conread position:
               335-933
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 38
               

               Conread position:
               336-520
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               81, 163
               

               Conread position:
               336-542
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               79, 30
               

               Conread position:
               336-551
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               336-874
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 192
               

               Conread position:
               336-934
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 77
               

               Conread position:
               339-512
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               340-592
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               78, 120
               

               Conread position:
               346-930
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 212
               

               Conread position:
               348-899
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 6
               

               Conread position:
               363-807
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 122
               

               Conread position:
               371-592
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               49, 38
               

               Conread position:
               390-666
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               23, 70
               

               Conread position:
               403-576
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               15, 144
               

               Conread position:
               407-714
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 75
               

               Conread position:
               420-783
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 12
               

               Conread position:
               425-936
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 225
               

               Conread position:
               431-910
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 128
               

               Conread position:
               434-901
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 175
               

               Conread position:
               441-920
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 112
               

               Conread position:
               443-932
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 52
               

               Conread position:
               443-933
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 10
               

               Conread position:
               458-852
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 37
               

               Conread position:
               510-935
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 35
               

               Conread position:
               513-923
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 32
               

               Conread position:
               528-933
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 17
               

               Conread position:
               545-901
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 100
               

               Conread position:
               545-936
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               59, 96
               

               Conread position:
               546-905
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               252
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               68, 46
               

               Conread position:
               557-923
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               50, 37
               

               Conread position:
               572-932
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               575-906
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               216, 20
               

               Conread position:
               578-936
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               259
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               596-935
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               52, 112
               

               Conread position:
               598-932
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               12, 46
               

               Conread position:
               598-933
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               229, 59
               

               Conread position:
               598-936
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 57
               

               Conread position:
               602-857
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               55, 33
               

               Conread position:
               615-932
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               615-936
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               156, 42
               

               Conread position:
               630-933
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               199, 16
               

               Conread position:
               633-906
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               142, 22
               

               Conread position:
               639-933
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 59
               

               Conread position:
               639-933
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 47
               

               Conread position:
               642-930
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               44, 15
               

               Conread position:
               655-932
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 49
               

               Conread position:
               657-872
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               126, 26
               

               Conread position:
               661-935
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               30, 87
               

               Conread position:
               670-933
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               119, 34
               

               Conread position:
               699-936
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 15
               

               Conread position:
               705-935
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               69, 193
               

               Conread position:
               714-901
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               720-933
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               49, 89
               

               Conread position:
               722-891
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 103
               

               Conread position:
               722-933
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               725-930
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               51, 9
               

               Conread position:
               754-923
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 63
               

               Conread position:
               770-936
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               782-936
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               46, 29
               

               Conread position:
               783-935
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               44, 28
               

               Conread position:
               783-935
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               44, 23
               

               Conread position:
               785-936
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               68, 26
               

               Conread position:
               802-935
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               813-933
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               13, 0
               
Show alignments to all cow chromosomes.