Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               300-764
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 14
               

               Conread position:
               312-537
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               93, 142
               

               Conread position:
               314-891
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 79
               

               Conread position:
               314-933
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 235
               

               Conread position:
               317-518
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               101, 8
               

               Conread position:
               317-932
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 71
               

               Conread position:
               319-681
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 203
               

               Conread position:
               319-725
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 78
               

               Conread position:
               319-922
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 78
               

               Conread position:
               320-494
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               98, 163
               

               Conread position:
               320-560
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               98, 22
               

               Conread position:
               320-582
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               98, 26
               

               Conread position:
               321-557
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               100, 127
               

               Conread position:
               321-882
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 52
               

               Conread position:
               321-935
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 61
               

               Conread position:
               330-557
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               337-556
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               372-669
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               222
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               49, 87
               

               Conread position:
               384-666
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               387-935
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 70
               

               Conread position:
               400-575
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               28, 120
               

               Conread position:
               456-892
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 160
               

               Conread position:
               460-936
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 47
               

               Conread position:
               474-883
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 161
               

               Conread position:
               543-924
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               258
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               567-931
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               276
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               26, 65
               

               Conread position:
               570-715
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 86
               

               Conread position:
               571-922
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               578-932
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 76
               

               Conread position:
               578-936
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               255
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               597-905
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               71, 22
               

               Conread position:
               602-922
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 48
               

               Conread position:
               602-930
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 53
               

               Conread position:
               609-930
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               185, 46
               

               Conread position:
               611-882
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 47
               

               Conread position:
               629-913
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               630-900
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               158, 25
               

               Conread position:
               655-929
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               121, 27
               

               Conread position:
               678-935
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               97, 26
               

               Conread position:
               689-935
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               94, 15
               

               Conread position:
               690-933
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               137, 14
               

               Conread position:
               690-936
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               6, 31
               

               Conread position:
               690-936
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               703-935
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               110, 50
               

               Conread position:
               721-931
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               18, 113
               

               Conread position:
               727-936
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               736-934
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               779-932
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               785-933
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               785-936
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               787-930
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 22
               
Show alignments to all cow chromosomes.