Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               288-932
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 24
               

               Conread position:
               299-934
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 98
               

               Conread position:
               310-931
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 199
               

               Conread position:
               314-474
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               319-548
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               319-558
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 14
               

               Conread position:
               319-919
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 141
               

               Conread position:
               319-933
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 38
               

               Conread position:
               319-936
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 57
               

               Conread position:
               320-531
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               93, 23
               

               Conread position:
               320-543
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               98, 53
               

               Conread position:
               320-556
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               77, 235
               

               Conread position:
               321-933
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 201
               

               Conread position:
               325-551
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               79, 160
               

               Conread position:
               336-542
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               336-788
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 44
               

               Conread position:
               342-516
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               346-542
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               348-550
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 127
               

               Conread position:
               360-922
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 132
               

               Conread position:
               382-932
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               386-555
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               418-840
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               187, 53
               

               Conread position:
               418-866
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 15
               

               Conread position:
               434-885
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 21
               

               Conread position:
               440-892
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 10
               

               Conread position:
               443-648
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               164, 102
               

               Conread position:
               452-712
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               145, 86
               

               Conread position:
               453-692
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               71, 92
               

               Conread position:
               456-665
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               137, 89
               

               Conread position:
               459-641
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               91, 29
               

               Conread position:
               467-898
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 57
               

               Conread position:
               474-882
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 92
               

               Conread position:
               487-935
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               310
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               113, 129
               

               Conread position:
               511-934
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               521-872
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               80, 127
               

               Conread position:
               533-781
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               23, 61
               

               Conread position:
               545-838
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               545-924
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               282
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               13, 120
               

               Conread position:
               545-932
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 8
               

               Conread position:
               545-936
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 104
               

               Conread position:
               548-786
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 120
               

               Conread position:
               554-773
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               46, 97
               

               Conread position:
               570-936
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               574-923
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               596-878
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               61, 23
               

               Conread position:
               596-900
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               170, 18
               

               Conread position:
               596-923
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               83, 25
               

               Conread position:
               597-907
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 60
               

               Conread position:
               597-929
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               7, 59
               

               Conread position:
               598-935
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               179, 59
               

               Conread position:
               601-924
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               13, 56
               

               Conread position:
               602-928
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               130, 48
               

               Conread position:
               603-935
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               172, 49
               

               Conread position:
               604-786
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               64, 53
               

               Conread position:
               628-932
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               630-933
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               634-925
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 80
               

               Conread position:
               637-935
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               139, 19
               

               Conread position:
               639-931
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               189, 22
               

               Conread position:
               653-936
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               212
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               140, 46
               

               Conread position:
               657-936
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               130, 47
               

               Conread position:
               659-931
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               118, 45
               

               Conread position:
               662-910
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               115, 44
               

               Conread position:
               664-905
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               111, 40
               

               Conread position:
               688-862
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               83, 16
               

               Conread position:
               688-936
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 16
               

               Conread position:
               706-936
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               720-929
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 165
               

               Conread position:
               739-930
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               37, 80
               

               Conread position:
               755-936
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               770-936
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               14, 29
               

               Conread position:
               776-936
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 31
               

               Conread position:
               779-930
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               785-933
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 26
               

               Conread position:
               808-936
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               846-932
               

               Cow position:
               
               

               Alignm length:
               87
               

               Alignm identity:
               75
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.