Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               300-932
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 5
               

               Conread position:
               308-484
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 94
               

               Conread position:
               309-934
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 155
               

               Conread position:
               309-936
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 160
               

               Conread position:
               319-429
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               319-709
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 54
               

               Conread position:
               319-713
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 191
               

               Conread position:
               319-774
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 85
               

               Conread position:
               319-786
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               316
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               323, 29
               

               Conread position:
               319-795
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 225
               

               Conread position:
               319-892
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 252
               

               Conread position:
               319-933
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 246
               

               Conread position:
               319-936
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 21
               

               Conread position:
               320-534
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               320-536
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               320-750
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 178
               

               Conread position:
               321-578
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               330-936
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 107
               

               Conread position:
               331-543
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               87, 11
               

               Conread position:
               335-933
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 198
               

               Conread position:
               336-516
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               336-543
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               82, 94
               

               Conread position:
               336-550
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               83, 37
               

               Conread position:
               336-844
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 154
               

               Conread position:
               336-936
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 54
               

               Conread position:
               337-933
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 255
               

               Conread position:
               338-623
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               45, 61
               

               Conread position:
               338-637
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 8
               

               Conread position:
               362-576
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               54, 214
               

               Conread position:
               391-538
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               401-560
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               417-935
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 139
               

               Conread position:
               418-733
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               237
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               175, 18
               

               Conread position:
               418-774
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 148
               

               Conread position:
               418-931
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 38
               

               Conread position:
               419-786
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 35
               

               Conread position:
               430-867
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               338, 56
               

               Conread position:
               435-678
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 43
               

               Conread position:
               442-885
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 65
               

               Conread position:
               443-824
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               280
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               7, 103
               

               Conread position:
               450-934
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 10
               

               Conread position:
               511-862
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 55
               

               Conread position:
               520-928
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 78
               

               Conread position:
               535-934
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 118
               

               Conread position:
               549-930
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 15
               

               Conread position:
               558-932
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 40
               

               Conread position:
               568-936
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 81
               

               Conread position:
               593-930
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               20, 31
               

               Conread position:
               613-904
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               175, 42
               

               Conread position:
               617-905
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               617-933
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               619-935
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 37
               

               Conread position:
               627-924
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               150, 28
               

               Conread position:
               655-878
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               662-936
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               39, 67
               

               Conread position:
               664-930
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               112, 33
               

               Conread position:
               674-932
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               104, 30
               

               Conread position:
               675-931
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               677-931
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               102, 27
               

               Conread position:
               683-936
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               12, 8
               

               Conread position:
               703-934
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               78, 34
               

               Conread position:
               738-870
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               755-935
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 63
               

               Conread position:
               779-936
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               779-936
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               48, 33
               

               Conread position:
               784-935
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               785-936
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               44, 26
               

               Conread position:
               788-924
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               40, 18
               
Show alignments to all cow chromosomes.