Cow genome map
| Conread name: | Thy1-THY010033A06 |
| Conread position: | 300-932 |
| Cow position: | chr14:47880048-47880674 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 5 |
| Conread position: | 308-484 |
| Cow position: | chr14:25362418-25362238 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 309-934 |
| Cow position: | chr14:28007682-28007059 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 155 |
| Conread position: | 309-936 |
| Cow position: | chr14:37983328-37983963 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 160 |
| Conread position: | 319-429 |
| Cow position: | chr14:42693993-42693883 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 319-709 |
| Cow position: | chr14:3588380-3588778 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 54 |
| Conread position: | 319-713 |
| Cow position: | chr14:38000584-38000203 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 191 |
| Conread position: | 319-774 |
| Cow position: | chr14:14835076-14835527 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 85 |
| Conread position: | 319-786 |
| Cow position: | chr14:46545940-46546383 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 316 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 323, 29 |
| Conread position: | 319-795 |
| Cow position: | chr14:21863969-21864419 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 225 |
| Conread position: | 319-892 |
| Cow position: | chr14:2298853-2299413 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 252 |
| Conread position: | 319-933 |
| Cow position: | chr14:15011402-15012034 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 246 |
| Conread position: | 319-936 |
| Cow position: | chr14:40244230-40243611 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 21 |
| Conread position: | 320-534 |
| Cow position: | chr14:44482998-44483208 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 320-536 |
| Cow position: | chr14:9255243-9255465 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 320-750 |
| Cow position: | chr14:45018437-45018859 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 178 |
| Conread position: | 321-578 |
| Cow position: | chr14:25993914-25994157 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 330-936 |
| Cow position: | chr14:31810690-31810112 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 107 |
| Conread position: | 331-543 |
| Cow position: | chr14:18984849-18985061 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 11 |
| Conread position: | 335-933 |
| Cow position: | chr14:41713064-41712475 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 198 |
| Conread position: | 336-516 |
| Cow position: | chr14:23526983-23526799 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 336-543 |
| Cow position: | chr14:43792104-43791896 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 94 |
| Conread position: | 336-550 |
| Cow position: | chr14:12643714-12643929 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 83, 37 |
| Conread position: | 336-844 |
| Cow position: | chr14:27578746-27579247 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 154 |
| Conread position: | 336-936 |
| Cow position: | chr14:35605268-35605874 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 54 |
| Conread position: | 337-933 |
| Cow position: | chr14:44886596-44885992 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 255 |
| Conread position: | 338-623 |
| Cow position: | chr14:3437031-3436746 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 45, 61 |
| Conread position: | 338-637 |
| Cow position: | chr14:47043826-47044140 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 78, 8 |
| Conread position: | 362-576 |
| Cow position: | chr14:10156716-10156494 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 214 |
| Conread position: | 391-538 |
| Cow position: | chr14:14419362-14419218 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 401-560 |
| Cow position: | chr14:23060135-23059974 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 417-935 |
| Cow position: | chr14:42693607-42693101 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 139 |
| Conread position: | 418-733 |
| Cow position: | chr14:30020897-30021203 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 175, 18 |
| Conread position: | 418-774 |
| Cow position: | chr14:45185306-45184963 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 148 |
| Conread position: | 418-931 |
| Cow position: | chr14:44454414-44453893 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 38 |
| Conread position: | 419-786 |
| Cow position: | chr14:24783198-24783560 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 35 |
| Conread position: | 430-867 |
| Cow position: | chr14:42258895-42258467 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 338, 56 |
| Conread position: | 435-678 |
| Cow position: | chr14:35682915-35683158 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 442-885 |
| Cow position: | chr14:24193273-24192821 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 65 |
| Conread position: | 443-824 |
| Cow position: | chr14:19339743-19340138 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 280 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 7, 103 |
| Conread position: | 450-934 |
| Cow position: | chr14:50650462-50649987 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 10 |
| Conread position: | 511-862 |
| Cow position: | chr14:24739123-24738755 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 520-928 |
| Cow position: | chr14:20642806-20643195 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 535-934 |
| Cow position: | chr14:10949662-10950061 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 118 |
| Conread position: | 549-930 |
| Cow position: | chr14:19734924-19735316 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 558-932 |
| Cow position: | chr14:34912130-34912503 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 568-936 |
| Cow position: | chr14:16715677-16715297 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 81 |
| Conread position: | 593-930 |
| Cow position: | chr14:15239035-15239364 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 613-904 |
| Cow position: | chr14:17556405-17556107 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 175, 42 |
| Conread position: | 617-905 |
| Cow position: | chr14:44483194-44483473 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 59, 38 |
| Conread position: | 617-933 |
| Cow position: | chr14:22046605-22046299 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 619-935 |
| Cow position: | chr14:12952054-12952356 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 37 |
| Conread position: | 627-924 |
| Cow position: | chr14:17051330-17051031 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 150, 28 |
| Conread position: | 655-878 |
| Cow position: | chr14:15662493-15662723 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 9, 53 |
| Conread position: | 662-936 |
| Cow position: | chr14:30762378-30762115 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 39, 67 |
| Conread position: | 664-930 |
| Cow position: | chr14:25994305-25994572 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 112, 33 |
| Conread position: | 674-932 |
| Cow position: | chr14:38722573-38722317 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 104, 30 |
| Conread position: | 675-931 |
| Cow position: | chr14:25448081-25447844 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 677-931 |
| Cow position: | chr14:32903930-32904185 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 102, 27 |
| Conread position: | 683-936 |
| Cow position: | chr14:36420341-36420594 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 12, 8 |
| Conread position: | 703-934 |
| Cow position: | chr14:38000079-37999851 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 78, 34 |
| Conread position: | 738-870 |
| Cow position: | chr14:44771727-44771588 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 755-935 |
| Cow position: | chr14:38413115-38412931 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 779-936 |
| Cow position: | chr14:17462892-17462740 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 779-936 |
| Cow position: | chr14:30134249-30134404 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 48, 33 |
| Conread position: | 784-935 |
| Cow position: | chr14:33999547-33999693 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 785-936 |
| Cow position: | chr14:29481226-29481375 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 788-924 |
| Cow position: | chr14:44023859-44023725 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 18 |
Show alignments to all cow chromosomes.