Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               310-744
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 258
               

               Conread position:
               311-515
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               107, 194
               

               Conread position:
               314-555
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               314-935
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 91
               

               Conread position:
               319-511
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               319-543
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               319-543
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               99, 200
               

               Conread position:
               319-547
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               96, 133
               

               Conread position:
               319-585
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               97, 123
               

               Conread position:
               319-630
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 138
               

               Conread position:
               319-875
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 93
               

               Conread position:
               319-904
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 171
               

               Conread position:
               319-934
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 85
               

               Conread position:
               319-936
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 60
               

               Conread position:
               319-936
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 29
               

               Conread position:
               320-436
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               320-543
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               174, 43
               

               Conread position:
               320-936
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 83
               

               Conread position:
               321-556
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               321-556
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               96, 52
               

               Conread position:
               322-543
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               336-936
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 235
               

               Conread position:
               337-934
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 185
               

               Conread position:
               338-543
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               80, 32
               

               Conread position:
               362-668
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               57, 98
               

               Conread position:
               373-935
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 146
               

               Conread position:
               374-924
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 69
               

               Conread position:
               382-923
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 149
               

               Conread position:
               391-559
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 65
               

               Conread position:
               393-903
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               394-775
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               30, 45
               

               Conread position:
               397-933
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 70
               

               Conread position:
               405-933
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 52
               

               Conread position:
               418-560
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               443-931
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               344, 116
               

               Conread position:
               456-680
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               144, 51
               

               Conread position:
               511-932
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 141
               

               Conread position:
               514-903
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               268
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               86, 146
               

               Conread position:
               545-905
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 117
               

               Conread position:
               545-920
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               48, 22
               

               Conread position:
               547-933
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 32
               

               Conread position:
               555-885
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               568-813
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               570-781
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               30, 87
               

               Conread position:
               570-794
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               570-905
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               245
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               30, 91
               

               Conread position:
               570-936
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               196, 50
               

               Conread position:
               602-932
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               184, 53
               

               Conread position:
               603-904
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               255, 33
               

               Conread position:
               607-923
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               220, 43
               

               Conread position:
               609-932
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               108, 42
               

               Conread position:
               611-779
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               93, 46
               

               Conread position:
               611-933
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               173, 44
               

               Conread position:
               618-905
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 26
               

               Conread position:
               621-931
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 34
               

               Conread position:
               625-935
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 30
               

               Conread position:
               626-923
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               158, 29
               

               Conread position:
               627-936
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               149, 28
               

               Conread position:
               629-932
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               53, 26
               

               Conread position:
               655-832
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               655-922
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               74, 49
               

               Conread position:
               659-936
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 42
               

               Conread position:
               665-934
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               115, 38
               

               Conread position:
               668-933
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               674-931
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               104, 30
               

               Conread position:
               683-936
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               55, 34
               

               Conread position:
               684-936
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               106, 20
               

               Conread position:
               691-893
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               702-936
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               70, 51
               

               Conread position:
               703-936
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               776-922
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 31
               

               Conread position:
               785-932
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               785-934
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               785-936
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 26
               

               Conread position:
               785-936
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               44, 21
               
Show alignments to all cow chromosomes.