Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               314-551
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               7, 160
               

               Conread position:
               314-931
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               314-932
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 126
               

               Conread position:
               317-517
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               103, 20
               

               Conread position:
               317-543
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               319-468
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 50
               

               Conread position:
               319-537
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               70, 40
               

               Conread position:
               319-561
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 170
               

               Conread position:
               319-561
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               98, 52
               

               Conread position:
               319-634
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               33, 113
               

               Conread position:
               319-676
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 149
               

               Conread position:
               319-715
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 143
               

               Conread position:
               319-931
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 251
               

               Conread position:
               319-934
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               319-934
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 33
               

               Conread position:
               319-934
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 249
               

               Conread position:
               320-554
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               94, 150
               

               Conread position:
               320-560
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               98, 19
               

               Conread position:
               320-561
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               76, 17
               

               Conread position:
               320-605
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               320-904
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 80
               

               Conread position:
               320-935
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 148
               

               Conread position:
               321-561
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 198
               

               Conread position:
               321-714
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               96, 30
               

               Conread position:
               322-636
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 265
               

               Conread position:
               322-664
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 44
               

               Conread position:
               330-525
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 5
               

               Conread position:
               330-548
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               88, 132
               

               Conread position:
               336-632
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 58
               

               Conread position:
               337-928
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 9
               

               Conread position:
               338-934
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 43
               

               Conread position:
               340-517
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               346-930
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 48
               

               Conread position:
               356-570
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 157
               

               Conread position:
               359-589
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               193, 46
               

               Conread position:
               362-933
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               421, 72
               

               Conread position:
               372-559
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               46, 6
               

               Conread position:
               373-936
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 136
               

               Conread position:
               390-726
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 166
               

               Conread position:
               404-935
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 52
               

               Conread position:
               415-733
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 42
               

               Conread position:
               420-898
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               443-792
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 74
               

               Conread position:
               445-664
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               155, 123
               

               Conread position:
               492-775
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 70
               

               Conread position:
               497-682
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               113, 48
               

               Conread position:
               529-932
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 37
               

               Conread position:
               542-936
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               545-919
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               554-928
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               271
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               40, 108
               

               Conread position:
               568-934
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               260
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               89, 33
               

               Conread position:
               588-932
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               22, 68
               

               Conread position:
               600-905
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               9, 119
               

               Conread position:
               600-933
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               179, 57
               

               Conread position:
               601-934
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               245
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               56, 49
               

               Conread position:
               604-933
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               224, 100
               

               Conread position:
               625-935
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               16, 82
               

               Conread position:
               630-928
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               151, 26
               

               Conread position:
               630-932
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               154, 25
               

               Conread position:
               644-936
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 39
               

               Conread position:
               648-931
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 56
               

               Conread position:
               655-918
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               126, 49
               

               Conread position:
               656-799
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               113, 48
               

               Conread position:
               657-900
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               5, 48
               

               Conread position:
               674-932
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               139, 30
               

               Conread position:
               697-934
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               82, 7
               

               Conread position:
               699-936
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               80, 121
               

               Conread position:
               702-932
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               707-936
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               71, 28
               

               Conread position:
               720-936
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               108, 61
               

               Conread position:
               721-936
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               106, 56
               

               Conread position:
               722-936
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               79, 31
               

               Conread position:
               724-936
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               47, 90
               

               Conread position:
               739-931
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               44, 67
               

               Conread position:
               740-904
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               36, 13
               

               Conread position:
               741-930
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               766-936
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               61, 45
               

               Conread position:
               770-919
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               785-936
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               43, 27
               

               Conread position:
               809-935
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               836-936
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.