Cow genome map
Conread name: | Thy1-THY010033A06 |
Conread position: | 314-551 |
Cow position: | chr16:19445752-19445993 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 177 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 7, 160 |
Conread position: | 314-931 |
Cow position: | chr16:41680792-41680166 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 477 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 14 |
Conread position: | 314-932 |
Cow position: | chr16:23035320-23034702 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 126 |
Conread position: | 317-517 |
Cow position: | chr16:12324085-12324285 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 137 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 103, 20 |
Conread position: | 317-543 |
Cow position: | chr16:55674691-55674468 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 168 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 18, 48 |
Conread position: | 319-468 |
Cow position: | chr16:6309803-6309953 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 94, 50 |
Conread position: | 319-537 |
Cow position: | chr16:4443815-4444024 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 155 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 70, 40 |
Conread position: | 319-561 |
Cow position: | chr16:4015308-4015557 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 172 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 50, 170 |
Conread position: | 319-561 |
Cow position: | chr16:5477377-5477137 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 169 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 98, 52 |
Conread position: | 319-634 |
Cow position: | chr16:341245-341553 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 225 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 33, 113 |
Conread position: | 319-676 |
Cow position: | chr16:19152676-19153047 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 149 |
Conread position: | 319-715 |
Cow position: | chr16:17867502-17867112 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 143 |
Conread position: | 319-931 |
Cow position: | chr16:22786063-22785449 (view UCSC Genome Browser custom track) |
Alignm length: | 631 |
Alignm identity: | 449 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 251 |
Conread position: | 319-934 |
Cow position: | chr16:13043801-13044445 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 13 |
Conread position: | 319-934 |
Cow position: | chr16:14799757-14799142 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 33 |
Conread position: | 319-934 |
Cow position: | chr16:47781278-47781901 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 249 |
Conread position: | 320-554 |
Cow position: | chr16:47729007-47729242 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 167 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 94, 150 |
Conread position: | 320-560 |
Cow position: | chr16:52900907-52900668 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 166 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 98, 19 |
Conread position: | 320-561 |
Cow position: | chr16:5593420-5593654 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 170 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 76, 17 |
Conread position: | 320-605 |
Cow position: | chr16:45551818-45552088 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 215 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 17, 11 |
Conread position: | 320-904 |
Cow position: | chr16:15508918-15509499 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 80 |
Conread position: | 320-935 |
Cow position: | chr16:53547609-53547018 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 148 |
Conread position: | 321-561 |
Cow position: | chr16:4677000-4677251 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 178 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 99, 198 |
Conread position: | 321-714 |
Cow position: | chr16:52814192-52813834 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 282 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 96, 30 |
Conread position: | 322-636 |
Cow position: | chr16:15734555-15734871 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 265 |
Conread position: | 322-664 |
Cow position: | chr16:36911059-36910710 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 44 |
Conread position: | 330-525 |
Cow position: | chr16:10838122-10838316 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 139 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 88, 5 |
Conread position: | 330-548 |
Cow position: | chr16:45157486-45157269 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 168 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 88, 132 |
Conread position: | 336-632 |
Cow position: | chr16:4856490-4856187 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 58 |
Conread position: | 337-928 |
Cow position: | chr16:4295526-4294938 (view UCSC Genome Browser custom track) |
Alignm length: | 604 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 9 |
Conread position: | 338-934 |
Cow position: | chr16:12243559-12242954 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 43 |
Conread position: | 340-517 |
Cow position: | chr16:16559017-16558836 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 138 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 76, 19 |
Conread position: | 346-930 |
Cow position: | chr16:43850822-43850234 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 48 |
Conread position: | 356-570 |
Cow position: | chr16:20857377-20857596 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 158 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 62, 157 |
Conread position: | 359-589 |
Cow position: | chr16:2375982-2375759 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 172 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 193, 46 |
Conread position: | 362-933 |
Cow position: | chr16:30572590-30572029 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 421, 72 |
Conread position: | 372-559 |
Cow position: | chr16:23747567-23747377 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 138 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 46, 6 |
Conread position: | 373-936 |
Cow position: | chr16:16118490-16119060 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 136 |
Conread position: | 390-726 |
Cow position: | chr16:14443961-14444294 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 166 |
Conread position: | 404-935 |
Cow position: | chr16:53516561-53516048 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 52 |
Conread position: | 415-733 |
Cow position: | chr16:31375095-31374783 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 239 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 29, 42 |
Conread position: | 420-898 |
Cow position: | chr16:11161499-11161927 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 443-792 |
Cow position: | chr16:47391150-47391479 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 74 |
Conread position: | 445-664 |
Cow position: | chr16:5131645-5131427 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 158 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 155, 123 |
Conread position: | 492-775 |
Cow position: | chr16:42406010-42406293 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 70 |
Conread position: | 497-682 |
Cow position: | chr16:6031479-6031299 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 132 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 113, 48 |
Conread position: | 529-932 |
Cow position: | chr16:48894629-48894229 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 37 |
Conread position: | 542-936 |
Cow position: | chr16:16608010-16608392 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 263 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 39, 20 |
Conread position: | 545-919 |
Cow position: | chr16:17003635-17004005 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 259 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 17, 7 |
Conread position: | 554-928 |
Cow position: | chr16:45057615-45058002 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 271 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 40, 108 |
Conread position: | 568-934 |
Cow position: | chr16:23301568-23301930 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 260 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 89, 33 |
Conread position: | 588-932 |
Cow position: | chr16:2371550-2371222 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 252 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 22, 68 |
Conread position: | 600-905 |
Cow position: | chr16:11751927-11752231 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 204 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 9, 119 |
Conread position: | 600-933 |
Cow position: | chr16:52650258-52649921 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 242 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 179, 57 |
Conread position: | 601-934 |
Cow position: | chr16:23878605-23878959 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 245 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 56, 49 |
Conread position: | 604-933 |
Cow position: | chr16:46029868-46030184 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 213 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 224, 100 |
Conread position: | 625-935 |
Cow position: | chr16:2722767-2722444 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 232 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 16, 82 |
Conread position: | 630-928 |
Cow position: | chr16:56373587-56373290 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 223 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 151, 26 |
Conread position: | 630-932 |
Cow position: | chr16:43850216-43849924 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 216 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 154, 25 |
Conread position: | 644-936 |
Cow position: | chr16:13209631-13209917 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 197 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 44, 39 |
Conread position: | 648-931 |
Cow position: | chr16:37508391-37508677 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 208 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 66, 56 |
Conread position: | 655-918 |
Cow position: | chr16:37441596-37441331 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 190 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 126, 49 |
Conread position: | 656-799 |
Cow position: | chr16:13416976-13416830 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 112 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 113, 48 |
Conread position: | 657-900 |
Cow position: | chr16:14423217-14423468 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 186 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 5, 48 |
Conread position: | 674-932 |
Cow position: | chr16:4854632-4854378 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 190 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 139, 30 |
Conread position: | 697-934 |
Cow position: | chr16:32352472-32352713 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 178 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 82, 7 |
Conread position: | 699-936 |
Cow position: | chr16:14084794-14084550 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 185 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 80, 121 |
Conread position: | 702-932 |
Cow position: | chr16:24038453-24038694 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 175 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 707-936 |
Cow position: | chr16:14444542-14444772 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 170 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 71, 28 |
Conread position: | 720-936 |
Cow position: | chr16:27075555-27075761 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 158 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 108, 61 |
Conread position: | 721-936 |
Cow position: | chr16:52731518-52731718 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 159 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 106, 56 |
Conread position: | 722-936 |
Cow position: | chr16:31374529-31374305 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 167 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 79, 31 |
Conread position: | 724-936 |
Cow position: | chr16:17219069-17218862 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 159 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 47, 90 |
Conread position: | 739-931 |
Cow position: | chr16:51456715-51456910 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 138 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 44, 67 |
Conread position: | 740-904 |
Cow position: | chr16:16622450-16622294 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 126 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 36, 13 |
Conread position: | 741-930 |
Cow position: | chr16:52813521-52813340 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 144 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 46, 71 |
Conread position: | 766-936 |
Cow position: | chr16:37024818-37024654 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 130 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 61, 45 |
Conread position: | 770-919 |
Cow position: | chr16:38397900-38397755 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 57, 15 |
Conread position: | 785-936 |
Cow position: | chr16:10198441-10198591 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 120 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 43, 27 |
Conread position: | 809-935 |
Cow position: | chr16:14824509-14824383 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 103 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 19, 39 |
Conread position: | 836-936 |
Cow position: | chr16:7086281-7086181 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 85 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.