Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               312-899
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 40
               

               Conread position:
               317-931
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 15
               

               Conread position:
               319-525
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               102, 40
               

               Conread position:
               319-543
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               319-621
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 51
               

               Conread position:
               319-769
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 186
               

               Conread position:
               319-935
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 84
               

               Conread position:
               320-495
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               320-559
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               98, 32
               

               Conread position:
               320-564
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 17
               

               Conread position:
               321-518
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 75
               

               Conread position:
               322-543
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               336-562
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               339-674
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 149
               

               Conread position:
               341-723
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 117
               

               Conread position:
               345-864
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 66
               

               Conread position:
               362-796
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 38
               

               Conread position:
               418-548
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               418-556
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               441-934
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 5
               

               Conread position:
               443-925
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 204
               

               Conread position:
               479-932
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 144
               

               Conread position:
               520-936
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 43
               

               Conread position:
               539-932
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               270
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               64, 323
               

               Conread position:
               546-934
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               294
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               24, 121
               

               Conread position:
               547-782
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               49, 78
               

               Conread position:
               566-924
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 11
               

               Conread position:
               574-935
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               26, 56
               

               Conread position:
               595-935
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               96, 40
               

               Conread position:
               597-872
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               158, 57
               

               Conread position:
               600-825
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               184, 44
               

               Conread position:
               602-919
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 56
               

               Conread position:
               616-860
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 20
               

               Conread position:
               618-933
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               209, 19
               

               Conread position:
               639-925
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               639-931
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               23, 66
               

               Conread position:
               639-935
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               144, 35
               

               Conread position:
               646-929
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               147, 55
               

               Conread position:
               664-932
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               164, 40
               

               Conread position:
               672-932
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 138
               

               Conread position:
               692-931
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               19, 5
               

               Conread position:
               702-933
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               704-934
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               128, 66
               

               Conread position:
               719-921
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               64, 7
               

               Conread position:
               729-934
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 88
               

               Conread position:
               738-889
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               39, 75
               

               Conread position:
               775-934
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               116, 53
               

               Conread position:
               776-936
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               51, 31
               

               Conread position:
               776-936
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 35
               

               Conread position:
               779-936
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 6
               

               Conread position:
               810-931
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               811-936
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               823-935
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.