Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               311-936
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 10
               

               Conread position:
               314-550
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               314-936
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 209
               

               Conread position:
               319-556
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               13, 137
               

               Conread position:
               319-591
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 194
               

               Conread position:
               319-673
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 26
               

               Conread position:
               319-872
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 189
               

               Conread position:
               320-541
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               98, 135
               

               Conread position:
               320-564
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               321-478
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               321-534
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               97, 52
               

               Conread position:
               322-932
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 64
               

               Conread position:
               336-932
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 110
               

               Conread position:
               336-933
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 85
               

               Conread position:
               340-505
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               341-545
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               77, 16
               

               Conread position:
               356-684
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 104
               

               Conread position:
               372-637
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 115
               

               Conread position:
               380-556
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 72
               

               Conread position:
               397-929
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 63
               

               Conread position:
               420-786
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 125
               

               Conread position:
               438-931
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 91
               

               Conread position:
               452-931
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 70
               

               Conread position:
               453-692
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               138, 91
               

               Conread position:
               456-891
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 201
               

               Conread position:
               467-842
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 59
               

               Conread position:
               487-746
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               72, 160
               

               Conread position:
               500-933
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 67
               

               Conread position:
               536-913
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               565-772
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 78
               

               Conread position:
               570-739
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               596-802
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               597-929
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               8, 41
               

               Conread position:
               601-930
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               171, 49
               

               Conread position:
               601-933
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 54
               

               Conread position:
               660-922
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               170, 44
               

               Conread position:
               661-934
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               61, 43
               

               Conread position:
               679-934
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 57
               

               Conread position:
               688-933
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               91, 16
               

               Conread position:
               711-935
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               715-935
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               728-936
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               43, 80
               

               Conread position:
               737-927
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 84
               

               Conread position:
               737-932
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               776-924
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               54, 30
               

               Conread position:
               776-931
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               53, 35
               

               Conread position:
               779-935
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               792-919
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 15
               

               Conread position:
               793-936
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               35, 18
               
Show alignments to all cow chromosomes.