Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               278-767
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 7
               

               Conread position:
               309-479
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               109, 5
               

               Conread position:
               311-931
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 213
               

               Conread position:
               312-543
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               6, 177
               

               Conread position:
               314-708
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 122
               

               Conread position:
               319-501
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               100, 42
               

               Conread position:
               319-538
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               99, 47
               

               Conread position:
               319-591
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 221
               

               Conread position:
               319-624
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               259, 8
               

               Conread position:
               319-640
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               104, 51
               

               Conread position:
               319-783
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 49
               

               Conread position:
               320-570
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               98, 229
               

               Conread position:
               320-932
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 125
               

               Conread position:
               321-574
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               97, 74
               

               Conread position:
               321-725
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 254
               

               Conread position:
               322-829
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 200
               

               Conread position:
               323-694
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 74
               

               Conread position:
               325-862
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 153
               

               Conread position:
               336-518
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               336-565
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               81, 110
               

               Conread position:
               337-775
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 65
               

               Conread position:
               338-518
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               353-583
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               367-932
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 49
               

               Conread position:
               369-550
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               376-936
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 81
               

               Conread position:
               401-930
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 153
               

               Conread position:
               429-614
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 60
               

               Conread position:
               443-575
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               443-786
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               157, 13
               

               Conread position:
               454-713
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               199
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               115, 47
               

               Conread position:
               457-751
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               88, 241
               

               Conread position:
               458-931
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 33
               

               Conread position:
               480-746
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               11, 66
               

               Conread position:
               487-903
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               137, 56
               

               Conread position:
               497-877
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 73
               

               Conread position:
               539-892
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 126
               

               Conread position:
               546-915
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               570-843
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               23, 50
               

               Conread position:
               595-936
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               54, 68
               

               Conread position:
               597-935
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               248
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               68, 58
               

               Conread position:
               602-919
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               244
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               7, 58
               

               Conread position:
               604-936
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 54
               

               Conread position:
               606-936
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               172, 50
               

               Conread position:
               624-911
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               144, 17
               

               Conread position:
               626-934
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               152, 29
               

               Conread position:
               627-930
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               224, 28
               

               Conread position:
               627-931
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               201, 23
               

               Conread position:
               648-933
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               655-804
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               124, 49
               

               Conread position:
               655-930
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               115, 49
               

               Conread position:
               661-928
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               172, 43
               

               Conread position:
               683-934
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               104, 21
               

               Conread position:
               686-932
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               93, 18
               

               Conread position:
               687-936
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               34, 17
               

               Conread position:
               691-922
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               118, 8
               

               Conread position:
               704-899
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 171
               

               Conread position:
               728-929
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 134
               

               Conread position:
               737-923
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               774-934
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               54, 36
               

               Conread position:
               784-931
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               43, 27
               

               Conread position:
               786-936
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               43, 25
               

               Conread position:
               793-930
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 0
               
Show alignments to all cow chromosomes.