Cow genome map

Conread name: Thy1-THY010033A06

Conread position: 309-932
Cow position: chr22:25457811-25458433 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 314-626
Cow position: chr22:42778160-42778458 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 151, 86

Conread position: 314-676
Cow position: chr22:45496546-45496909 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 259
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 57, 226

Conread position: 319-750
Cow position: chr22:14508610-14508183 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 127

Conread position: 319-931
Cow position: chr22:7281193-7281812 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 54

Conread position: 320-543
Cow position: chr22:25405009-25404782 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 98, 36

Conread position: 320-551
Cow position: chr22:39303021-39302787 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 135

Conread position: 320-592
Cow position: chr22:42762064-42762323 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 320-602
Cow position: chr22:24335518-24335232 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 98, 243

Conread position: 321-538
Cow position: chr22:14820588-14820374 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 96, 138

Conread position: 321-561
Cow position: chr22:15496497-15496725 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 322-514
Cow position: chr22:42978036-42978227 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 95, 46

Conread position: 322-604
Cow position: chr22:19295886-19296171 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 21

Conread position: 325-516
Cow position: chr22:15876784-15876593 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 159

Conread position: 335-781
Cow position: chr22:609940-609506 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 31

Conread position: 336-559
Cow position: chr22:43044176-43043948 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 0

Conread position: 337-551
Cow position: chr22:35143231-35143445 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 117

Conread position: 339-694
Cow position: chr22:45291504-45291866 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 50

Conread position: 347-669
Cow position: chr22:12628489-12628172 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 64

Conread position: 357-774
Cow position: chr22:28755487-28755084 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 242

Conread position: 370-775
Cow position: chr22:15696182-15696601 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 134

Conread position: 397-542
Cow position: chr22:14018428-14018574 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 418-934
Cow position: chr22:32018551-32018031 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 25

Conread position: 421-781
Cow position: chr22:47385893-47385520 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 169, 142

Conread position: 443-936
Cow position: chr22:4057880-4058383 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 101

Conread position: 463-730
Cow position: chr22:29005477-29005203 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 64, 109

Conread position: 507-936
Cow position: chr22:44637744-44638179 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 51

Conread position: 520-936
Cow position: chr22:29064508-29064925 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 45

Conread position: 525-786
Cow position: chr22:39904638-39904386 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 87, 28

Conread position: 542-936
Cow position: chr22:15873501-15873884 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 11

Conread position: 545-936
Cow position: chr22:34649418-34649817 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 275
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 179

Conread position: 546-925
Cow position: chr22:8714076-8714443 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 255
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 16

Conread position: 564-924
Cow position: chr22:40046287-40046653 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 253
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 12, 89

Conread position: 567-933
Cow position: chr22:12537367-12536994 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 12

Conread position: 601-936
Cow position: chr22:42421488-42421164 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 182, 56

Conread position: 604-919
Cow position: chr22:13997724-13998023 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 253, 46

Conread position: 608-933
Cow position: chr22:13083303-13083604 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 27

Conread position: 610-933
Cow position: chr22:41321568-41321893 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 45

Conread position: 619-936
Cow position: chr22:44037453-44037767 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 11, 36

Conread position: 621-925
Cow position: chr22:18324669-18324365 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 5, 55

Conread position: 627-931
Cow position: chr22:34087248-34086934 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 151, 31

Conread position: 657-905
Cow position: chr22:45787899-45787657 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 67, 47

Conread position: 662-932
Cow position: chr22:12627964-12627681 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 27, 13

Conread position: 677-923
Cow position: chr22:5358649-5358900 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 104, 27

Conread position: 683-929
Cow position: chr22:39424284-39424529 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 94, 21

Conread position: 691-935
Cow position: chr22:11752847-11752610 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 7, 88

Conread position: 702-924
Cow position: chr22:22010641-22010415 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 35

Conread position: 702-931
Cow position: chr22:29004950-29004710 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 9, 190

Conread position: 707-934
Cow position: chr22:44687298-44687540 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 75, 0

Conread position: 720-936
Cow position: chr22:11749187-11748980 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 88, 77

Conread position: 776-931
Cow position: chr22:24435921-24435767 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 35

Conread position: 779-931
Cow position: chr22:1533012-1533160 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 27

Conread position: 790-934
Cow position: chr22:45788037-45787896 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 21

Show alignments to all cow chromosomes.