Cow genome map
| Conread name: | Thy1-THY010033A06 |
| Conread position: | 311-712 |
| Cow position: | chr23:7253043-7253459 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 60 |
| Conread position: | 319-733 |
| Cow position: | chr23:5265530-5265119 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 181 |
| Conread position: | 319-921 |
| Cow position: | chr23:9546387-9546970 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 319-933 |
| Cow position: | chr23:25079197-25078607 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 53 |
| Conread position: | 321-521 |
| Cow position: | chr23:8737847-8737642 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 321-528 |
| Cow position: | chr23:11069199-11069400 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 81, 75 |
| Conread position: | 321-934 |
| Cow position: | chr23:16170695-16171322 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 58 |
| Conread position: | 322-518 |
| Cow position: | chr23:39323829-39324034 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 325-929 |
| Cow position: | chr23:25408823-25409412 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 18 |
| Conread position: | 331-781 |
| Cow position: | chr23:20216879-20217317 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 26 |
| Conread position: | 336-518 |
| Cow position: | chr23:33723788-33723961 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 149, 43 |
| Conread position: | 336-527 |
| Cow position: | chr23:38026820-38026626 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 336-536 |
| Cow position: | chr23:3715761-3715957 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 336-542 |
| Cow position: | chr23:7751198-7751406 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 81, 185 |
| Conread position: | 336-559 |
| Cow position: | chr23:20173183-20173408 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 82, 66 |
| Conread position: | 336-913 |
| Cow position: | chr23:23285122-23285669 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 84 |
| Conread position: | 345-538 |
| Cow position: | chr23:15054077-15054275 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 352-551 |
| Cow position: | chr23:15694376-15694576 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 76, 56 |
| Conread position: | 362-543 |
| Cow position: | chr23:1083468-1083285 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 89 |
| Conread position: | 362-556 |
| Cow position: | chr23:29104250-29104048 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 363-509 |
| Cow position: | chr23:23916611-23916764 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 393-545 |
| Cow position: | chr23:38248924-38249082 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 411-711 |
| Cow position: | chr23:30127891-30127583 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 182, 76 |
| Conread position: | 419-556 |
| Cow position: | chr23:16480966-16480832 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 443-933 |
| Cow position: | chr23:39070111-39069617 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 104 |
| Conread position: | 458-929 |
| Cow position: | chr23:36674645-36674181 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 226 |
| Conread position: | 459-933 |
| Cow position: | chr23:24401082-24400580 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 91 |
| Conread position: | 464-732 |
| Cow position: | chr23:9724893-9724639 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 94, 54 |
| Conread position: | 497-935 |
| Cow position: | chr23:23917036-23917479 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 63 |
| Conread position: | 520-793 |
| Cow position: | chr23:38026499-38026230 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 73, 119 |
| Conread position: | 543-930 |
| Cow position: | chr23:31026372-31025993 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 49 |
| Conread position: | 580-929 |
| Cow position: | chr23:22605714-22605379 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 596-936 |
| Cow position: | chr23:16479647-16479298 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 9, 61 |
| Conread position: | 620-933 |
| Cow position: | chr23:15147717-15147407 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 37 |
| Conread position: | 653-933 |
| Cow position: | chr23:30691704-30691427 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 118, 10 |
| Conread position: | 655-932 |
| Cow position: | chr23:39822784-39823063 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 671-935 |
| Cow position: | chr23:36484088-36483831 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 135, 33 |
| Conread position: | 688-936 |
| Cow position: | chr23:34514536-34514285 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 108, 16 |
| Conread position: | 689-933 |
| Cow position: | chr23:27900433-27900667 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 697-915 |
| Cow position: | chr23:7253587-7253794 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 77, 7 |
| Conread position: | 702-920 |
| Cow position: | chr23:32845653-32845433 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 74, 114 |
| Conread position: | 704-924 |
| Cow position: | chr23:2330408-2330191 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 31 |
| Conread position: | 712-934 |
| Cow position: | chr23:20023841-20024069 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 41 |
| Conread position: | 720-932 |
| Cow position: | chr23:9425826-9425608 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 720-933 |
| Cow position: | chr23:37036471-37036263 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 57, 84 |
| Conread position: | 785-936 |
| Cow position: | chr23:6963719-6963576 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 785-936 |
| Cow position: | chr23:9723992-9723847 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 26 |
Show alignments to all cow chromosomes.