Cow genome map
| Conread name: | Thy1-THY010033A06 |
| Conread position: | 310-905 |
| Cow position: | chr25:18206330-18205748 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 15 |
| Conread position: | 319-623 |
| Cow position: | chr25:14279242-14279545 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 146 |
| Conread position: | 319-629 |
| Cow position: | chr25:30035527-30035830 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 86, 167 |
| Conread position: | 319-786 |
| Cow position: | chr25:5567786-5567309 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 349 |
| Conread position: | 320-538 |
| Cow position: | chr25:17660237-17660459 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 98, 50 |
| Conread position: | 321-545 |
| Cow position: | chr25:30528217-30527996 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 97, 48 |
| Conread position: | 322-560 |
| Cow position: | chr25:10013451-10013210 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 99, 200 |
| Conread position: | 336-543 |
| Cow position: | chr25:13471903-13471697 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 34 |
| Conread position: | 336-564 |
| Cow position: | chr25:34236582-34236350 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 87, 173 |
| Conread position: | 336-933 |
| Cow position: | chr25:16240601-16240025 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 337-502 |
| Cow position: | chr25:33786091-33785933 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 338-566 |
| Cow position: | chr25:30614138-30614370 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 78, 182 |
| Conread position: | 343-628 |
| Cow position: | chr25:35038637-35038346 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 37 |
| Conread position: | 345-616 |
| Cow position: | chr25:18644071-18643791 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 214 |
| Conread position: | 362-560 |
| Cow position: | chr25:27798228-27798425 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 11 |
| Conread position: | 367-556 |
| Cow position: | chr25:23842276-23842468 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 443-864 |
| Cow position: | chr25:36235710-36235297 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 64 |
| Conread position: | 468-839 |
| Cow position: | chr25:33924831-33925203 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 131, 98 |
| Conread position: | 497-935 |
| Cow position: | chr25:13123370-13123813 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 66 |
| Conread position: | 499-859 |
| Cow position: | chr25:16193372-16193010 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 77, 51 |
| Conread position: | 507-935 |
| Cow position: | chr25:13704174-13704611 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 132 |
| Conread position: | 521-919 |
| Cow position: | chr25:16940688-16940272 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 141 |
| Conread position: | 539-934 |
| Cow position: | chr25:8618214-8617825 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 37, 56 |
| Conread position: | 551-933 |
| Cow position: | chr25:17472872-17473253 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 554-930 |
| Cow position: | chr25:19686545-19686157 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 567-929 |
| Cow position: | chr25:11962063-11962414 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 568-936 |
| Cow position: | chr25:20457557-20457212 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 212, 26 |
| Conread position: | 570-925 |
| Cow position: | chr25:6680559-6680218 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 88, 69 |
| Conread position: | 600-930 |
| Cow position: | chr25:35560358-35560038 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 612-930 |
| Cow position: | chr25:20180743-20181060 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 622-936 |
| Cow position: | chr25:5377358-5377049 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 22 |
| Conread position: | 624-858 |
| Cow position: | chr25:30036034-30036273 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 163, 13 |
| Conread position: | 625-935 |
| Cow position: | chr25:14279731-14280033 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 172, 30 |
| Conread position: | 639-935 |
| Cow position: | chr25:33325906-33326195 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 134, 22 |
| Conread position: | 655-936 |
| Cow position: | chr25:5534133-5533864 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 55, 8 |
| Conread position: | 657-930 |
| Cow position: | chr25:33345962-33346221 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 121, 38 |
| Conread position: | 669-936 |
| Cow position: | chr25:40833106-40832834 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 52, 27 |
| Conread position: | 671-919 |
| Cow position: | chr25:13224622-13224864 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 183, 26 |
| Conread position: | 672-935 |
| Cow position: | chr25:10010221-10009963 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 121, 32 |
| Conread position: | 678-919 |
| Cow position: | chr25:20497129-20497367 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 707-925 |
| Cow position: | chr25:8447823-8448038 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 713-934 |
| Cow position: | chr25:16687743-16687514 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 7, 127 |
| Conread position: | 721-924 |
| Cow position: | chr25:20624179-20624390 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 733-936 |
| Cow position: | chr25:15564576-15564781 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 71, 36 |
| Conread position: | 776-936 |
| Cow position: | chr25:20423311-20423471 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 35 |
| Conread position: | 826-932 |
| Cow position: | chr25:3685685-3685581 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
Show alignments to all cow chromosomes.