Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               308-871
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 9
               

               Conread position:
               314-536
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               106, 156
               

               Conread position:
               314-929
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 67
               

               Conread position:
               319-932
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 94
               

               Conread position:
               319-934
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 54
               

               Conread position:
               320-496
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               86, 123
               

               Conread position:
               320-534
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               97, 183
               

               Conread position:
               320-542
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               17, 13
               

               Conread position:
               320-931
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 416
               

               Conread position:
               321-504
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               98, 12
               

               Conread position:
               321-560
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               321-560
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               97, 9
               

               Conread position:
               336-560
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               337-538
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               81, 110
               

               Conread position:
               341-516
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               31, 156
               

               Conread position:
               402-933
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 120
               

               Conread position:
               419-637
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               191, 125
               

               Conread position:
               430-556
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               513-934
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               536-807
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               58, 96
               

               Conread position:
               545-924
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               156, 50
               

               Conread position:
               545-935
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               135, 8
               

               Conread position:
               547-933
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               271
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               568-928
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 75
               

               Conread position:
               570-934
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               23, 140
               

               Conread position:
               571-933
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 82
               

               Conread position:
               586-932
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               8, 74
               

               Conread position:
               596-807
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               11, 60
               

               Conread position:
               602-936
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               247
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               55, 17
               

               Conread position:
               603-931
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               629-936
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               108, 26
               

               Conread position:
               639-934
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               19, 67
               

               Conread position:
               655-905
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               84, 49
               

               Conread position:
               667-936
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               109, 19
               

               Conread position:
               696-913
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               84, 8
               

               Conread position:
               702-920
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               704-932
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               80, 131
               

               Conread position:
               709-934
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               69, 27
               

               Conread position:
               721-936
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               172
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               750-935
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               78, 6
               

               Conread position:
               754-930
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               810-934
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 12
               
Show alignments to all cow chromosomes.