Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               319-493
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               319-670
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               104, 63
               

               Conread position:
               319-681
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 153
               

               Conread position:
               320-548
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               103, 118
               

               Conread position:
               320-560
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               321-473
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               321-523
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               321-543
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               321-551
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               321-592
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 52
               

               Conread position:
               321-935
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 82
               

               Conread position:
               335-936
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 116
               

               Conread position:
               336-613
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 119
               

               Conread position:
               337-548
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               81, 63
               

               Conread position:
               337-936
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 235
               

               Conread position:
               338-931
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 50
               

               Conread position:
               340-543
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               61, 39
               

               Conread position:
               342-775
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               310
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               79, 31
               

               Conread position:
               345-591
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               200, 27
               

               Conread position:
               362-932
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 196
               

               Conread position:
               406-806
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 66
               

               Conread position:
               421-929
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 75
               

               Conread position:
               452-798
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 247
               

               Conread position:
               473-930
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 71
               

               Conread position:
               483-935
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 6
               

               Conread position:
               502-875
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               269
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               58, 199
               

               Conread position:
               537-929
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               32, 59
               

               Conread position:
               547-892
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               576-936
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               580-913
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               53, 22
               

               Conread position:
               595-923
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               138, 19
               

               Conread position:
               596-921
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               231, 48
               

               Conread position:
               597-936
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 22
               

               Conread position:
               614-928
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               170, 41
               

               Conread position:
               636-919
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               639-835
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               139, 42
               

               Conread position:
               661-931
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               116, 43
               

               Conread position:
               670-931
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               119, 34
               

               Conread position:
               670-936
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               111, 34
               

               Conread position:
               703-934
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               125, 65
               

               Conread position:
               704-932
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               50, 33
               

               Conread position:
               706-930
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               7, 79
               

               Conread position:
               713-935
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               724-934
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               49, 96
               

               Conread position:
               788-935
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               788-936
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               795-935
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 16
               

               Conread position:
               798-932
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               813-936
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               814-934
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               814-936
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 0
               
Show alignments to all cow chromosomes.