Cow genome map

Conread name: Thy1-THY010033A06

Conread position: 271-545
Cow position:
Alignm length: 276
Alignm identity: 183
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 10

Conread position: 306-512
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 115, 19

Conread position: 311-495
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 45

Conread position: 318-543
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 100, 27

Conread position: 319-474
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 138

Conread position: 319-502
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 16

Conread position: 319-558
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 55, 37

Conread position: 319-632
Cow position:
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 81

Conread position: 319-647
Cow position:
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 91

Conread position: 319-727
Cow position:
Alignm length: 420
Alignm identity: 285
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 102, 48

Conread position: 319-758
Cow position:
Alignm length: 450
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 75

Conread position: 319-901
Cow position:
Alignm length: 613
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 9

Conread position: 319-926
Cow position:
Alignm length: 630
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 63

Conread position: 319-932
Cow position:
Alignm length: 635
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 74

Conread position: 319-932
Cow position:
Alignm length: 625
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 436, 88

Conread position: 319-936
Cow position:
Alignm length: 654
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 37

Conread position: 320-551
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 98, 0

Conread position: 320-553
Cow position:
Alignm length: 240
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 0

Conread position: 320-560
Cow position:
Alignm length: 248
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 155

Conread position: 320-562
Cow position:
Alignm length: 248
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 36

Conread position: 320-574
Cow position:
Alignm length: 261
Alignm identity: 176
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 54

Conread position: 320-786
Cow position:
Alignm length: 472
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 150

Conread position: 320-934
Cow position:
Alignm length: 634
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 118

Conread position: 321-524
Cow position:
Alignm length: 210
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 321-551
Cow position:
Alignm length: 231
Alignm identity: 154
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 321-932
Cow position:
Alignm length: 658
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 38

Conread position: 325-586
Cow position:
Alignm length: 267
Alignm identity: 193
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 94, 195

Conread position: 335-724
Cow position:
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 158

Conread position: 336-518
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 336-543
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 125

Conread position: 336-551
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 82, 0

Conread position: 336-561
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 336-572
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 191

Conread position: 336-724
Cow position:
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 98

Conread position: 336-920
Cow position:
Alignm length: 608
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 15

Conread position: 337-931
Cow position:
Alignm length: 615
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 234

Conread position: 338-543
Cow position:
Alignm length: 206
Alignm identity: 139
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 346-542
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 152

Conread position: 347-543
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 43

Conread position: 358-936
Cow position:
Alignm length: 625
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 26

Conread position: 382-934
Cow position:
Alignm length: 568
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 74

Conread position: 402-551
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 101

Conread position: 402-561
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 123

Conread position: 431-936
Cow position:
Alignm length: 517
Alignm identity: 339
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 161, 55

Conread position: 443-922
Cow position:
Alignm length: 494
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 88

Conread position: 457-930
Cow position:
Alignm length: 493
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 61

Conread position: 466-923
Cow position:
Alignm length: 466
Alignm identity: 307
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 312, 100

Conread position: 489-724
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 169

Conread position: 512-918
Cow position:
Alignm length: 420
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 148

Conread position: 526-923
Cow position:
Alignm length: 413
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 40

Conread position: 546-905
Cow position:
Alignm length: 369
Alignm identity: 241
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 49

Conread position: 550-890
Cow position:
Alignm length: 364
Alignm identity: 241
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 17

Conread position: 554-918
Cow position:
Alignm length: 384
Alignm identity: 272
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 39, 108

Conread position: 554-924
Cow position:
Alignm length: 378
Alignm identity: 242
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 44

Conread position: 554-935
Cow position:
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 7

Conread position: 554-936
Cow position:
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 164

Conread position: 558-933
Cow position:
Alignm length: 393
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 105

Conread position: 564-932
Cow position:
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 98

Conread position: 568-932
Cow position:
Alignm length: 378
Alignm identity: 268
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 32, 93

Conread position: 569-924
Cow position:
Alignm length: 362
Alignm identity: 234
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 10

Conread position: 570-867
Cow position:
Alignm length: 306
Alignm identity: 221
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 87, 37

Conread position: 575-913
Cow position:
Alignm length: 344
Alignm identity: 234
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 17

Conread position: 596-934
Cow position:
Alignm length: 340
Alignm identity: 231
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 221, 10

Conread position: 596-936
Cow position:
Alignm length: 346
Alignm identity: 233
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 34

Conread position: 600-781
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 175, 55

Conread position: 600-861
Cow position:
Alignm length: 280
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 56

Conread position: 610-858
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 172, 45

Conread position: 613-936
Cow position:
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 41

Conread position: 621-936
Cow position:
Alignm length: 318
Alignm identity: 217
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 16, 35

Conread position: 622-934
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 117, 82

Conread position: 625-922
Cow position:
Alignm length: 301
Alignm identity: 202
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 204, 30

Conread position: 627-905
Cow position:
Alignm length: 286
Alignm identity: 193
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 17

Conread position: 628-915
Cow position:
Alignm length: 290
Alignm identity: 191
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 200, 27

Conread position: 630-920
Cow position:
Alignm length: 299
Alignm identity: 219
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 28, 9

Conread position: 630-931
Cow position:
Alignm length: 304
Alignm identity: 220
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 198, 25

Conread position: 631-922
Cow position:
Alignm length: 303
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 24

Conread position: 639-864
Cow position:
Alignm length: 235
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 23

Conread position: 639-934
Cow position:
Alignm length: 307
Alignm identity: 220
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 145, 65

Conread position: 646-882
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 12, 39

Conread position: 649-929
Cow position:
Alignm length: 293
Alignm identity: 215
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 128, 55

Conread position: 649-931
Cow position:
Alignm length: 290
Alignm identity: 217
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 31, 24

Conread position: 651-936
Cow position:
Alignm length: 290
Alignm identity: 201
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 8, 53

Conread position: 655-882
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 120, 31

Conread position: 655-924
Cow position:
Alignm length: 274
Alignm identity: 195
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 126, 16

Conread position: 655-931
Cow position:
Alignm length: 285
Alignm identity: 194
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 123, 47

Conread position: 655-934
Cow position:
Alignm length: 291
Alignm identity: 204
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 126, 47

Conread position: 659-923
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 87, 45

Conread position: 660-936
Cow position:
Alignm length: 289
Alignm identity: 215
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 117, 44

Conread position: 670-936
Cow position:
Alignm length: 272
Alignm identity: 203
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 13, 37

Conread position: 671-935
Cow position:
Alignm length: 274
Alignm identity: 183
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 156, 33

Conread position: 672-932
Cow position:
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 32

Conread position: 674-863
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 30

Conread position: 674-881
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 104, 30

Conread position: 691-934
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 5

Conread position: 696-934
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 8

Conread position: 706-935
Cow position:
Alignm length: 238
Alignm identity: 181
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 78, 112

Conread position: 707-929
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 717-934
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 52, 20

Conread position: 720-933
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 17

Conread position: 721-868
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 96

Conread position: 763-935
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 54

Conread position: 779-924
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 27

Conread position: 783-931
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 28

Conread position: 785-932
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.