Cow genome map
Conread name: | Thy1-THY010033A06 |
Conread position: | 2-307 |
Cow position: | chr4:29222984-29222697 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 262, 13 |
Conread position: | 289-550 |
Cow position: | chr4:20926039-20925777 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 192 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 23, 58 |
Conread position: | 292-501 |
Cow position: | chr4:57566543-57566330 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 155 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 13, 27 |
Conread position: | 302-700 |
Cow position: | chr4:29222568-29222164 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 253 |
Conread position: | 312-669 |
Cow position: | chr4:32749165-32749540 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 326 |
Conread position: | 314-543 |
Cow position: | chr4:52597510-52597266 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 169 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 314-936 |
Cow position: | chr4:5189044-5188418 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 48 |
Conread position: | 314-936 |
Cow position: | chr4:49741514-49742149 (view UCSC Genome Browser custom track) |
Alignm length: | 661 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 65 |
Conread position: | 319-479 |
Cow position: | chr4:21162642-21162797 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 128 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 100, 71 |
Conread position: | 319-503 |
Cow position: | chr4:5623228-5623042 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 144 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 101, 140 |
Conread position: | 319-550 |
Cow position: | chr4:6630318-6630088 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 177 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 102, 54 |
Conread position: | 319-670 |
Cow position: | chr4:8597720-8597363 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 240 |
Conread position: | 319-681 |
Cow position: | chr4:31586853-31586488 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 81 |
Conread position: | 319-726 |
Cow position: | chr4:4300508-4300915 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 288 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 7, 41 |
Conread position: | 319-776 |
Cow position: | chr4:34043654-34043194 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 66 |
Conread position: | 319-905 |
Cow position: | chr4:47510994-47511589 (view UCSC Genome Browser custom track) |
Alignm length: | 602 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 254 |
Conread position: | 319-932 |
Cow position: | chr4:9822120-9822733 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 120 |
Conread position: | 319-932 |
Cow position: | chr4:41975744-41975136 (view UCSC Genome Browser custom track) |
Alignm length: | 623 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 230 |
Conread position: | 319-936 |
Cow position: | chr4:39646646-39647245 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 36 |
Conread position: | 320-528 |
Cow position: | chr4:29951577-29951367 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 148 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 98, 141 |
Conread position: | 320-543 |
Cow position: | chr4:9649978-9650206 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 157 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 97, 56 |
Conread position: | 320-543 |
Cow position: | chr4:61171882-61172101 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 161 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 84, 11 |
Conread position: | 320-551 |
Cow position: | chr4:57652213-57652449 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 320-714 |
Cow position: | chr4:17176122-17176510 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 229 |
Conread position: | 321-574 |
Cow position: | chr4:45114630-45114378 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 189 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 100, 67 |
Conread position: | 322-475 |
Cow position: | chr4:58433243-58433086 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 125 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 97, 154 |
Conread position: | 330-919 |
Cow position: | chr4:29067660-29067080 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 21 |
Conread position: | 334-552 |
Cow position: | chr4:61191455-61191678 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 150 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 336-539 |
Cow position: | chr4:53763135-53762930 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 161 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 81, 153 |
Conread position: | 336-551 |
Cow position: | chr4:3133248-3133462 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 155 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 80, 162 |
Conread position: | 336-709 |
Cow position: | chr4:58833228-58832854 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 43 |
Conread position: | 340-541 |
Cow position: | chr4:41895643-41895849 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 139 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 356-565 |
Cow position: | chr4:5777044-5776836 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 157 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 59, 115 |
Conread position: | 360-537 |
Cow position: | chr4:58856740-58856560 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 137 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 60, 20 |
Conread position: | 368-556 |
Cow position: | chr4:31349605-31349416 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 138 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 50, 92 |
Conread position: | 369-782 |
Cow position: | chr4:59565556-59565981 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 9 |
Conread position: | 382-512 |
Cow position: | chr4:49884964-49884830 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 39, 9 |
Conread position: | 382-934 |
Cow position: | chr4:53641356-53641900 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 173 |
Conread position: | 387-713 |
Cow position: | chr4:27443870-27444206 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 280 |
Conread position: | 402-793 |
Cow position: | chr4:6793419-6793802 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 25 |
Conread position: | 412-551 |
Cow position: | chr4:68107432-68107296 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 105 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 424-936 |
Cow position: | chr4:57222145-57221626 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 127 |
Conread position: | 429-664 |
Cow position: | chr4:60159626-60159387 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 180 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 62, 41 |
Conread position: | 438-896 |
Cow position: | chr4:46875429-46874957 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 233 |
Conread position: | 443-720 |
Cow position: | chr4:51905264-51905532 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 204 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 482-934 |
Cow position: | chr4:60640071-60639626 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 114 |
Conread position: | 489-936 |
Cow position: | chr4:58432822-58432375 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 18 |
Conread position: | 491-934 |
Cow position: | chr4:60662547-60662983 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 72 |
Conread position: | 496-933 |
Cow position: | chr4:57566061-57565635 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 70 |
Conread position: | 497-910 |
Cow position: | chr4:2238089-2237693 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 278 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 54, 107 |
Conread position: | 500-889 |
Cow position: | chr4:21162792-21163193 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 161 |
Conread position: | 527-878 |
Cow position: | chr4:58856341-58855977 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 251 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 43, 138 |
Conread position: | 540-786 |
Cow position: | chr4:24713460-24713220 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 181 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 236, 24 |
Conread position: | 545-882 |
Cow position: | chr4:47087211-47086880 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 231 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 14, 72 |
Conread position: | 545-929 |
Cow position: | chr4:58873446-58873825 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 257 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 16, 134 |
Conread position: | 545-931 |
Cow position: | chr4:13920220-13919843 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 256 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 25, 8 |
Conread position: | 560-930 |
Cow position: | chr4:11635053-11634678 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 250 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 5, 37 |
Conread position: | 579-790 |
Cow position: | chr4:13926430-13926224 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 152 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 596-928 |
Cow position: | chr4:15046114-15046465 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 253 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 87, 59 |
Conread position: | 597-935 |
Cow position: | chr4:36759520-36759875 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 228 |
Conread position: | 597-936 |
Cow position: | chr4:5783979-5784304 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 58 |
Conread position: | 599-890 |
Cow position: | chr4:3244920-3245199 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 193 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 256, 40 |
Conread position: | 600-931 |
Cow position: | chr4:22507129-22506797 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 50 |
Conread position: | 602-887 |
Cow position: | chr4:20925751-20925468 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 213 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 175, 33 |
Conread position: | 619-936 |
Cow position: | chr4:54314340-54314044 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 213 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 304, 27 |
Conread position: | 628-898 |
Cow position: | chr4:15283465-15283732 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 194 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 114, 27 |
Conread position: | 631-932 |
Cow position: | chr4:57652493-57652803 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 225 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 142, 24 |
Conread position: | 631-936 |
Cow position: | chr4:31003075-31002765 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 225 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 154, 24 |
Conread position: | 639-931 |
Cow position: | chr4:5499196-5499489 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 199 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 22, 72 |
Conread position: | 655-936 |
Cow position: | chr4:25924654-25924371 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 210 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 126, 49 |
Conread position: | 657-930 |
Cow position: | chr4:49881702-49881409 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 212 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 38, 50 |
Conread position: | 657-932 |
Cow position: | chr4:6630017-6629744 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 200 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 5, 48 |
Conread position: | 663-936 |
Cow position: | chr4:31586286-31586015 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 205 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 113, 41 |
Conread position: | 674-936 |
Cow position: | chr4:5886663-5886925 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 30 |
Conread position: | 675-872 |
Cow position: | chr4:54347527-54347731 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 156 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 102, 29 |
Conread position: | 680-885 |
Cow position: | chr4:9089751-9089539 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 152 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 64, 21 |
Conread position: | 688-924 |
Cow position: | chr4:52597213-52596970 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 184 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 81, 9 |
Conread position: | 699-935 |
Cow position: | chr4:45401004-45401237 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 165 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 87, 44 |
Conread position: | 702-916 |
Cow position: | chr4:42495636-42495432 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 149 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 703-934 |
Cow position: | chr4:52697228-52697458 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 166 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 98, 14 |
Conread position: | 720-905 |
Cow position: | chr4:4029196-4029390 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 153 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 55, 33 |
Conread position: | 720-905 |
Cow position: | chr4:47409187-47409364 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 134 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 107, 48 |
Conread position: | 728-935 |
Cow position: | chr4:4132896-4133102 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 156 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 47, 59 |
Conread position: | 779-924 |
Cow position: | chr4:23536423-23536565 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 112 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 48, 27 |
Conread position: | 785-919 |
Cow position: | chr4:6793927-6794058 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 43, 27 |
Conread position: | 785-935 |
Cow position: | chr4:34043160-34043012 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 120 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 43, 26 |
Conread position: | 785-936 |
Cow position: | chr4:4519590-4519739 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 112 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 43, 26 |
Conread position: | 793-936 |
Cow position: | chr4:56219376-56219508 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 112 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Show alignments to all cow chromosomes.