Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               308-936
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 86
               

               Conread position:
               310-679
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               314-641
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               314-905
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 176
               

               Conread position:
               314-936
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 210
               

               Conread position:
               317-525
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               101, 129
               

               Conread position:
               317-551
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 13
               

               Conread position:
               319-551
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               319-556
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               97, 134
               

               Conread position:
               319-892
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 251
               

               Conread position:
               319-905
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 37
               

               Conread position:
               319-934
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 125
               

               Conread position:
               319-935
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 26
               

               Conread position:
               319-936
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 76
               

               Conread position:
               320-501
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               320-578
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               93, 256
               

               Conread position:
               321-518
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               97, 59
               

               Conread position:
               321-538
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               321-543
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               321-931
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 62
               

               Conread position:
               330-543
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               87, 102
               

               Conread position:
               330-933
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 38
               

               Conread position:
               336-475
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               336-542
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               336-544
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               82, 125
               

               Conread position:
               336-561
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               60, 145
               

               Conread position:
               336-932
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 20
               

               Conread position:
               340-542
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 127
               

               Conread position:
               341-924
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 53
               

               Conread position:
               348-537
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 49
               

               Conread position:
               363-931
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 40
               

               Conread position:
               375-935
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 147
               

               Conread position:
               386-857
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 167
               

               Conread position:
               408-672
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 156
               

               Conread position:
               418-735
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               237, 145
               

               Conread position:
               419-696
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               210, 37
               

               Conread position:
               443-882
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               339, 96
               

               Conread position:
               446-681
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               210, 120
               

               Conread position:
               456-611
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               457-930
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 17
               

               Conread position:
               466-669
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               133, 54
               

               Conread position:
               471-727
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               473-786
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               489-678
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               102, 69
               

               Conread position:
               489-885
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               292
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               78, 184
               

               Conread position:
               489-934
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               313
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               286, 55
               

               Conread position:
               491-936
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               309
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               103, 75
               

               Conread position:
               492-685
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               53, 109
               

               Conread position:
               497-679
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 153
               

               Conread position:
               528-931
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               105, 26
               

               Conread position:
               533-935
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               42, 129
               

               Conread position:
               545-812
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               8, 96
               

               Conread position:
               545-931
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               545-932
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               275
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               55, 106
               

               Conread position:
               545-935
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               274
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               550-909
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               554-936
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 111
               

               Conread position:
               559-919
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               570-792
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               31, 93
               

               Conread position:
               570-928
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 86
               

               Conread position:
               571-934
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 84
               

               Conread position:
               572-933
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               579-924
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               243
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               208, 76
               

               Conread position:
               597-862
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               167, 54
               

               Conread position:
               599-933
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               600-934
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               178, 37
               

               Conread position:
               601-936
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 57
               

               Conread position:
               602-935
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               158, 39
               

               Conread position:
               603-934
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 48
               

               Conread position:
               605-911
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               33, 21
               

               Conread position:
               605-931
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               631-875
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               196, 26
               

               Conread position:
               651-934
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               6, 54
               

               Conread position:
               655-936
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               116, 49
               

               Conread position:
               659-932
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               136, 45
               

               Conread position:
               662-932
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               111, 56
               

               Conread position:
               664-920
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               121, 40
               

               Conread position:
               670-935
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               107, 34
               

               Conread position:
               670-936
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               107, 34
               

               Conread position:
               673-933
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               5, 14
               

               Conread position:
               673-936
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               81, 31
               

               Conread position:
               674-884
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               104, 30
               

               Conread position:
               674-934
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               120, 30
               

               Conread position:
               677-933
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               98, 27
               

               Conread position:
               686-884
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               89, 18
               

               Conread position:
               688-905
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               107, 19
               

               Conread position:
               688-936
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               96, 16
               

               Conread position:
               689-936
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               702-933
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               130, 48
               

               Conread position:
               717-932
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               718-936
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               719-933
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 112
               

               Conread position:
               720-885
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               755-935
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               761-931
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               15, 52
               

               Conread position:
               783-932
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               785-931
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 21
               

               Conread position:
               785-932
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               786-931
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 25
               

               Conread position:
               787-929
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               795-936
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               813-936
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               842-936
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               80
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.