Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               309-692
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 221
               

               Conread position:
               311-894
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 37
               

               Conread position:
               313-923
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 136
               

               Conread position:
               319-470
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               102, 130
               

               Conread position:
               319-484
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               102, 58
               

               Conread position:
               319-543
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               70, 23
               

               Conread position:
               319-891
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 109
               

               Conread position:
               319-935
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 137
               

               Conread position:
               319-936
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 91
               

               Conread position:
               320-498
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               93, 53
               

               Conread position:
               320-528
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               98, 51
               

               Conread position:
               320-538
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               99, 73
               

               Conread position:
               320-556
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               84, 75
               

               Conread position:
               320-556
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               98, 224
               

               Conread position:
               320-576
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               96, 60
               

               Conread position:
               320-933
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 236
               

               Conread position:
               321-518
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               97, 151
               

               Conread position:
               321-539
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               321-541
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               35, 62
               

               Conread position:
               321-774
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 237
               

               Conread position:
               330-528
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 63
               

               Conread position:
               330-560
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 5
               

               Conread position:
               335-543
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 79
               

               Conread position:
               336-534
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 36
               

               Conread position:
               336-543
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               336-556
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               336-560
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               82, 191
               

               Conread position:
               336-560
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               190, 57
               

               Conread position:
               336-931
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 195
               

               Conread position:
               336-934
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 222
               

               Conread position:
               337-628
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               89, 214
               

               Conread position:
               337-934
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 97
               

               Conread position:
               338-541
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               27, 67
               

               Conread position:
               339-564
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               79, 43
               

               Conread position:
               339-932
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 129
               

               Conread position:
               340-543
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               78, 135
               

               Conread position:
               342-518
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               77, 20
               

               Conread position:
               345-910
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 88
               

               Conread position:
               350-754
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 30
               

               Conread position:
               352-560
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               69, 7
               

               Conread position:
               356-669
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               25, 82
               

               Conread position:
               364-934
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 37
               

               Conread position:
               388-902
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 166
               

               Conread position:
               405-680
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               418-536
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               418-885
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 98
               

               Conread position:
               435-581
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               442-709
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 47
               

               Conread position:
               443-670
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               471-789
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               86, 189
               

               Conread position:
               533-934
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               535-933
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 58
               

               Conread position:
               537-777
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               543-853
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 11
               

               Conread position:
               543-936
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               50, 118
               

               Conread position:
               547-888
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 76
               

               Conread position:
               550-924
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               50, 107
               

               Conread position:
               564-936
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               122, 13
               

               Conread position:
               578-919
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               23, 43
               

               Conread position:
               579-934
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 138
               

               Conread position:
               599-934
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               10, 109
               

               Conread position:
               602-936
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               96, 34
               

               Conread position:
               606-921
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 49
               

               Conread position:
               618-891
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               88, 28
               

               Conread position:
               638-878
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               649-930
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               655-860
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               121, 47
               

               Conread position:
               659-885
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               152, 43
               

               Conread position:
               661-934
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               166, 43
               

               Conread position:
               662-915
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               69, 34
               

               Conread position:
               670-916
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               128, 34
               

               Conread position:
               674-931
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               108, 27
               

               Conread position:
               676-935
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               204
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               677-898
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               97, 27
               

               Conread position:
               679-934
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               149, 25
               

               Conread position:
               688-924
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               101, 13
               

               Conread position:
               688-931
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               87, 11
               

               Conread position:
               688-932
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               688-933
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               115, 16
               

               Conread position:
               697-934
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               75, 42
               

               Conread position:
               702-933
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               74, 115
               

               Conread position:
               702-936
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               126, 77
               

               Conread position:
               728-924
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               100, 68
               

               Conread position:
               753-931
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               754-931
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               22, 65
               

               Conread position:
               754-931
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               22, 65
               

               Conread position:
               756-936
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               18, 56
               

               Conread position:
               769-934
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               15, 44
               

               Conread position:
               776-931
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               786-929
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               41, 25
               

               Conread position:
               791-933
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 20
               

               Conread position:
               796-936
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 15
               
Show alignments to all cow chromosomes.