Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               309-554
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               112, 42
               

               Conread position:
               309-681
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               280
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               309-681
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               310-805
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 145
               

               Conread position:
               314-884
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 68
               

               Conread position:
               314-935
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 58
               

               Conread position:
               315-485
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               10, 86
               

               Conread position:
               319-562
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               88, 228
               

               Conread position:
               319-867
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 26
               

               Conread position:
               319-921
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 118
               

               Conread position:
               319-930
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               319-934
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 295
               

               Conread position:
               319-934
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 208
               

               Conread position:
               319-935
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               319-935
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               319-936
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 99
               

               Conread position:
               320-518
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               96, 138
               

               Conread position:
               320-531
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               320-559
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 204
               

               Conread position:
               320-560
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               95, 142
               

               Conread position:
               320-681
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               320-934
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 229
               

               Conread position:
               321-528
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               321-538
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               128, 48
               

               Conread position:
               321-543
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               321-551
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               94, 228
               

               Conread position:
               321-680
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               96, 14
               

               Conread position:
               322-551
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               97, 140
               

               Conread position:
               325-548
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               96, 41
               

               Conread position:
               326-867
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               336-516
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               336-538
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               336-543
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               80, 124
               

               Conread position:
               336-786
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 180
               

               Conread position:
               336-892
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 266
               

               Conread position:
               356-641
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               75, 17
               

               Conread position:
               367-543
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               53, 29
               

               Conread position:
               415-640
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               177, 36
               

               Conread position:
               436-935
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 207
               

               Conread position:
               447-709
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               146, 103
               

               Conread position:
               453-634
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               49, 114
               

               Conread position:
               457-641
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               135, 58
               

               Conread position:
               462-933
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 83
               

               Conread position:
               463-891
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 92
               

               Conread position:
               479-913
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 74
               

               Conread position:
               511-936
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               281
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               544-919
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               8, 124
               

               Conread position:
               545-911
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 117
               

               Conread position:
               546-919
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               275
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               23, 136
               

               Conread position:
               546-922
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               553-771
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               41, 94
               

               Conread position:
               555-929
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               260
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               41, 107
               

               Conread position:
               555-930
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               41, 107
               

               Conread position:
               556-933
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               19, 105
               

               Conread position:
               570-920
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               36, 62
               

               Conread position:
               596-839
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               180, 58
               

               Conread position:
               600-898
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               117, 55
               

               Conread position:
               607-905
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               615-795
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               615-931
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 40
               

               Conread position:
               621-936
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               37, 85
               

               Conread position:
               639-919
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               19, 67
               

               Conread position:
               654-786
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               657-923
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               58, 47
               

               Conread position:
               666-935
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               161, 35
               

               Conread position:
               670-923
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               31, 145
               

               Conread position:
               678-934
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               88, 26
               

               Conread position:
               688-935
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               129, 16
               

               Conread position:
               702-885
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               720-936
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               753-932
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               32, 172
               

               Conread position:
               770-936
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 37
               

               Conread position:
               776-934
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 35
               

               Conread position:
               779-936
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               50, 32
               

               Conread position:
               780-918
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               780-935
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               47, 31
               

               Conread position:
               785-931
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.