Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               314-560
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               104, 7
               

               Conread position:
               319-520
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               102, 39
               

               Conread position:
               319-590
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               88, 180
               

               Conread position:
               319-725
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 90
               

               Conread position:
               319-888
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 36
               

               Conread position:
               319-905
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 22
               

               Conread position:
               319-919
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 202
               

               Conread position:
               319-931
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 249
               

               Conread position:
               319-932
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 56
               

               Conread position:
               319-933
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 40
               

               Conread position:
               319-933
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               319-934
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 117
               

               Conread position:
               320-502
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               98, 54
               

               Conread position:
               320-554
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               74, 110
               

               Conread position:
               320-557
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               320-557
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               320-891
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 360
               

               Conread position:
               320-932
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 60
               

               Conread position:
               321-474
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               96, 59
               

               Conread position:
               321-561
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               321-572
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               86, 186
               

               Conread position:
               321-633
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 85
               

               Conread position:
               321-934
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 66
               

               Conread position:
               335-517
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 18
               

               Conread position:
               335-933
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 108
               

               Conread position:
               336-502
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               336-518
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               82, 162
               

               Conread position:
               336-543
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               336-556
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 60
               

               Conread position:
               336-564
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               85, 64
               

               Conread position:
               336-936
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 110
               

               Conread position:
               339-633
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               68, 119
               

               Conread position:
               339-637
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 196
               

               Conread position:
               341-585
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               77, 108
               

               Conread position:
               345-907
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 220
               

               Conread position:
               363-933
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 8
               

               Conread position:
               441-931
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 104
               

               Conread position:
               446-930
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 16
               

               Conread position:
               459-793
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               70, 105
               

               Conread position:
               459-936
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               330
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               141, 85
               

               Conread position:
               466-933
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               346
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               130, 33
               

               Conread position:
               508-884
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 162
               

               Conread position:
               545-919
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               30, 78
               

               Conread position:
               545-931
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 94
               

               Conread position:
               545-933
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               100, 19
               

               Conread position:
               545-936
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 7
               

               Conread position:
               546-781
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 144
               

               Conread position:
               554-924
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 96
               

               Conread position:
               564-924
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               15, 62
               

               Conread position:
               566-935
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               9, 71
               

               Conread position:
               569-872
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               8, 27
               

               Conread position:
               570-936
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 96
               

               Conread position:
               593-936
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               251
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               594-920
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 49
               

               Conread position:
               601-917
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               212, 50
               

               Conread position:
               602-903
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 40
               

               Conread position:
               603-924
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               15, 102
               

               Conread position:
               605-732
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               608-936
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 37
               

               Conread position:
               609-933
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 46
               

               Conread position:
               611-933
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               639-931
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               137, 22
               

               Conread position:
               639-935
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 54
               

               Conread position:
               661-921
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               146, 43
               

               Conread position:
               702-932
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               125, 67
               

               Conread position:
               704-934
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               720-923
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               720-931
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               68, 93
               

               Conread position:
               720-934
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               25, 138
               

               Conread position:
               732-931
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               50, 21
               

               Conread position:
               766-930
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 42
               

               Conread position:
               779-935
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               785-933
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               826-926
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               831-929
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.