Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               307-930
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 11
               

               Conread position:
               309-623
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               119, 98
               

               Conread position:
               311-934
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 305
               

               Conread position:
               312-936
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 207
               

               Conread position:
               314-559
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               314-608
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               107, 41
               

               Conread position:
               317-551
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               101, 61
               

               Conread position:
               319-591
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               101, 37
               

               Conread position:
               319-715
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 21
               

               Conread position:
               319-932
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 106
               

               Conread position:
               319-936
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 137
               

               Conread position:
               320-419
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               320-484
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               96, 46
               

               Conread position:
               320-538
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               43, 192
               

               Conread position:
               320-551
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               98, 31
               

               Conread position:
               320-556
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               98, 50
               

               Conread position:
               320-556
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               98, 31
               

               Conread position:
               320-572
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               98, 55
               

               Conread position:
               320-573
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               87, 225
               

               Conread position:
               320-574
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               96, 139
               

               Conread position:
               321-515
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               321-560
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               107, 14
               

               Conread position:
               322-538
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               89, 58
               

               Conread position:
               322-932
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 13
               

               Conread position:
               323-678
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 343
               

               Conread position:
               325-461
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 45
               

               Conread position:
               325-534
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               92, 48
               

               Conread position:
               331-559
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               84, 10
               

               Conread position:
               336-543
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               336-790
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 243
               

               Conread position:
               336-913
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 53
               

               Conread position:
               337-543
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               78, 43
               

               Conread position:
               337-560
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               81, 33
               

               Conread position:
               341-775
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               342-931
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 31
               

               Conread position:
               343-539
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               347-584
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 23
               

               Conread position:
               347-932
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 218
               

               Conread position:
               363-796
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               420-896
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 77
               

               Conread position:
               429-730
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               167, 121
               

               Conread position:
               437-786
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 125
               

               Conread position:
               438-904
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 102
               

               Conread position:
               456-935
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 51
               

               Conread position:
               458-790
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               142, 18
               

               Conread position:
               459-935
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 94
               

               Conread position:
               481-936
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 186
               

               Conread position:
               484-892
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               296
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               21, 7
               

               Conread position:
               487-931
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 79
               

               Conread position:
               497-780
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               95, 23
               

               Conread position:
               522-767
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               542-918
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               269
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               70, 11
               

               Conread position:
               548-934
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               30, 48
               

               Conread position:
               554-933
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               90, 74
               

               Conread position:
               554-935
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               574-775
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               576-934
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               602-928
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               225, 49
               

               Conread position:
               602-930
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 56
               

               Conread position:
               603-844
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               80, 16
               

               Conread position:
               605-777
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               30, 51
               

               Conread position:
               612-934
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               215, 18
               

               Conread position:
               619-903
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               627-934
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               162, 9
               

               Conread position:
               655-880
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               117, 47
               

               Conread position:
               657-928
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               128, 47
               

               Conread position:
               658-934
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               112, 34
               

               Conread position:
               661-932
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               21, 47
               

               Conread position:
               663-935
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               38, 49
               

               Conread position:
               664-905
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               112, 40
               

               Conread position:
               677-934
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               99, 27
               

               Conread position:
               688-930
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               94, 16
               

               Conread position:
               697-936
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               58, 7
               

               Conread position:
               719-936
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               136, 58
               

               Conread position:
               720-892
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               49, 88
               

               Conread position:
               729-935
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               70, 27
               

               Conread position:
               739-923
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               89, 40
               

               Conread position:
               753-936
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               24, 64
               

               Conread position:
               776-931
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               779-930
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               785-931
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               785-936
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               43, 21
               

               Conread position:
               790-931
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               812-934
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               813-934
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               14, 0
               
Show alignments to all cow chromosomes.