Cow genome map
Conread name: | Thy1-THY010033A06 |
Conread position: | 285-936 |
Cow position: | chrX:18814142-18814805 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 490 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 205 |
Conread position: | 302-936 |
Cow position: | chrX:25453175-25453801 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 78 |
Conread position: | 309-560 |
Cow position: | chrX:19818880-19818625 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 172 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 109, 101 |
Conread position: | 311-551 |
Cow position: | chrX:11982137-11982368 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 176 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 7, 52 |
Conread position: | 311-936 |
Cow position: | chrX:2147345-2147938 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 455 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 55 |
Conread position: | 314-933 |
Cow position: | chrX:2186256-2186882 (view UCSC Genome Browser custom track) |
Alignm length: | 656 |
Alignm identity: | 476 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 215 |
Conread position: | 319-484 |
Cow position: | chrX:37956365-37956529 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 125 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 102, 36 |
Conread position: | 319-495 |
Cow position: | chrX:24952548-24952372 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 136 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 101, 81 |
Conread position: | 319-531 |
Cow position: | chrX:12826759-12826975 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 156 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 98, 81 |
Conread position: | 319-534 |
Cow position: | chrX:24827314-24827534 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 159 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 13, 17 |
Conread position: | 319-556 |
Cow position: | chrX:30729404-30729165 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 168 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 98, 165 |
Conread position: | 319-745 |
Cow position: | chrX:10311755-10312171 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 141 |
Conread position: | 319-781 |
Cow position: | chrX:8558454-8557999 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 54 |
Conread position: | 319-919 |
Cow position: | chrX:12689078-12688464 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 232 |
Conread position: | 319-934 |
Cow position: | chrX:11675073-11675703 (view UCSC Genome Browser custom track) |
Alignm length: | 641 |
Alignm identity: | 467 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 252 |
Conread position: | 320-503 |
Cow position: | chrX:13245606-13245790 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 141 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 96, 138 |
Conread position: | 320-591 |
Cow position: | chrX:4631662-4631390 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 60 |
Conread position: | 320-891 |
Cow position: | chrX:4597716-4597113 (view UCSC Genome Browser custom track) |
Alignm length: | 616 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 83 |
Conread position: | 320-923 |
Cow position: | chrX:24201191-24201773 (view UCSC Genome Browser custom track) |
Alignm length: | 616 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 31 |
Conread position: | 320-935 |
Cow position: | chrX:23254196-23253589 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 151 |
Conread position: | 321-639 |
Cow position: | chrX:24285967-24286292 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 237 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 100, 187 |
Conread position: | 321-932 |
Cow position: | chrX:20504726-20505330 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 467 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 152 |
Conread position: | 322-795 |
Cow position: | chrX:41660189-41660636 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 330 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 99, 137 |
Conread position: | 325-934 |
Cow position: | chrX:19018241-19017611 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 469 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 43 |
Conread position: | 336-562 |
Cow position: | chrX:35925981-35926212 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 157 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 336-932 |
Cow position: | chrX:21816291-21816891 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 449 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 134 |
Conread position: | 339-536 |
Cow position: | chrX:42758103-42758304 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 147 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 79, 21 |
Conread position: | 339-543 |
Cow position: | chrX:20810316-20810118 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 147 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 79, 91 |
Conread position: | 359-933 |
Cow position: | chrX:16816721-16817267 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 160 |
Conread position: | 362-905 |
Cow position: | chrX:21886064-21885501 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 9 |
Conread position: | 385-905 |
Cow position: | chrX:956555-957086 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 140 |
Conread position: | 388-886 |
Cow position: | chrX:43647686-43647180 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 105 |
Conread position: | 402-542 |
Cow position: | chrX:4754656-4754794 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 106 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 22, 43 |
Conread position: | 409-936 |
Cow position: | chrX:25106311-25106832 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 252 |
Conread position: | 415-746 |
Cow position: | chrX:1426869-1427186 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 241 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 90, 152 |
Conread position: | 418-711 |
Cow position: | chrX:3405034-3404745 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 211 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 151, 38 |
Conread position: | 418-786 |
Cow position: | chrX:31816803-31817147 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 323, 14 |
Conread position: | 419-933 |
Cow position: | chrX:9910641-9910132 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 33 |
Conread position: | 443-714 |
Cow position: | chrX:18517923-18518210 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 213 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 150, 222 |
Conread position: | 447-936 |
Cow position: | chrX:4590092-4590577 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 76 |
Conread position: | 451-681 |
Cow position: | chrX:19217182-19216946 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 174 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 65, 211 |
Conread position: | 465-713 |
Cow position: | chrX:9051276-9051028 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 179 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 94, 58 |
Conread position: | 468-934 |
Cow position: | chrX:40353471-40353935 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 47 |
Conread position: | 491-793 |
Cow position: | chrX:24952190-24951893 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 233 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 7, 149 |
Conread position: | 500-928 |
Cow position: | chrX:27458542-27458117 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 97 |
Conread position: | 516-933 |
Cow position: | chrX:19127432-19127017 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 50 |
Conread position: | 535-936 |
Cow position: | chrX:6471929-6472339 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 26 |
Conread position: | 540-896 |
Cow position: | chrX:25921559-25921214 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 254 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 59, 26 |
Conread position: | 542-919 |
Cow position: | chrX:17200636-17200999 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 246 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 285, 65 |
Conread position: | 545-933 |
Cow position: | chrX:17516452-17516823 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 259 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 15, 7 |
Conread position: | 545-936 |
Cow position: | chrX:10462547-10462935 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 262 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 45, 81 |
Conread position: | 546-934 |
Cow position: | chrX:11982831-11983212 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 285 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 57, 109 |
Conread position: | 550-930 |
Cow position: | chrX:10534314-10534703 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 271 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 42, 11 |
Conread position: | 553-922 |
Cow position: | chrX:4625142-4625528 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 110 |
Conread position: | 567-788 |
Cow position: | chrX:32546141-32546369 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 169 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 7, 87 |
Conread position: | 568-932 |
Cow position: | chrX:20715982-20715623 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 239 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 24, 94 |
Conread position: | 569-919 |
Cow position: | chrX:4424914-4425261 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 236 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 39, 79 |
Conread position: | 570-931 |
Cow position: | chrX:18700107-18699735 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 12 |
Conread position: | 571-928 |
Cow position: | chrX:37364672-37365020 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 252 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 29, 82 |
Conread position: | 573-904 |
Cow position: | chrX:4794235-4793916 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 223 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 62, 21 |
Conread position: | 591-919 |
Cow position: | chrX:4631095-4630764 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 65 |
Conread position: | 593-919 |
Cow position: | chrX:37139585-37139899 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 212 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 13, 65 |
Conread position: | 597-934 |
Cow position: | chrX:25653400-25653712 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 243 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 230, 58 |
Conread position: | 598-934 |
Cow position: | chrX:40698529-40698848 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 242 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 26, 49 |
Conread position: | 601-934 |
Cow position: | chrX:4601351-4601028 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 231 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 603-781 |
Cow position: | chrX:39190944-39190768 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 126 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 610-931 |
Cow position: | chrX:28515875-28515577 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 219 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 64, 45 |
Conread position: | 611-936 |
Cow position: | chrX:13403445-13403120 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 44 |
Conread position: | 627-919 |
Cow position: | chrX:263809-263531 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 195 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 194, 30 |
Conread position: | 636-936 |
Cow position: | chrX:4440174-4440480 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 230 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 139, 25 |
Conread position: | 639-923 |
Cow position: | chrX:37236335-37236618 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 216 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 130, 18 |
Conread position: | 648-936 |
Cow position: | chrX:5956992-5956710 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 216 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 7, 25 |
Conread position: | 654-936 |
Cow position: | chrX:44248892-44248611 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 190 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 56, 19 |
Conread position: | 655-932 |
Cow position: | chrX:1330453-1330173 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 206 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 133, 49 |
Conread position: | 673-936 |
Cow position: | chrX:37749011-37749286 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 198 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 103, 31 |
Conread position: | 705-933 |
Cow position: | chrX:6672170-6672405 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 175 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 71, 23 |
Conread position: | 712-935 |
Cow position: | chrX:18518438-18518664 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 171 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 69, 25 |
Conread position: | 720-929 |
Cow position: | chrX:11851360-11851153 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 153 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 64, 30 |
Conread position: | 720-936 |
Cow position: | chrX:34100426-34100636 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 157 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 77, 70 |
Conread position: | 737-936 |
Cow position: | chrX:19391839-19391645 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 151 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 47, 16 |
Conread position: | 747-934 |
Cow position: | chrX:503117-502936 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 142 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 81, 36 |
Conread position: | 776-930 |
Cow position: | chrX:20958051-20958201 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 52, 35 |
Conread position: | 779-932 |
Cow position: | chrX:35552819-35552964 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 121 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 50, 32 |
Conread position: | 779-934 |
Cow position: | chrX:30785032-30785182 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 117 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 783-912 |
Cow position: | chrX:30729305-30729178 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 45, 28 |
Conread position: | 785-925 |
Cow position: | chrX:1427755-1427892 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 43, 26 |
Conread position: | 785-935 |
Cow position: | chrX:24286540-24286684 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 42, 26 |
Show alignments to all cow chromosomes.