Cow genome map


           Conread name:
           Thy1-THY010033A06
        

               Conread position:
               285-936
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 205
               

               Conread position:
               302-936
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 78
               

               Conread position:
               309-560
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               109, 101
               

               Conread position:
               311-551
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               7, 52
               

               Conread position:
               311-936
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 55
               

               Conread position:
               314-933
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 215
               

               Conread position:
               319-484
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               102, 36
               

               Conread position:
               319-495
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               101, 81
               

               Conread position:
               319-531
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               98, 81
               

               Conread position:
               319-534
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               13, 17
               

               Conread position:
               319-556
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               98, 165
               

               Conread position:
               319-745
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 141
               

               Conread position:
               319-781
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 54
               

               Conread position:
               319-919
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 232
               

               Conread position:
               319-934
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 252
               

               Conread position:
               320-503
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               96, 138
               

               Conread position:
               320-591
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 60
               

               Conread position:
               320-891
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 83
               

               Conread position:
               320-923
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 31
               

               Conread position:
               320-935
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 151
               

               Conread position:
               321-639
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               237
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               100, 187
               

               Conread position:
               321-932
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 152
               

               Conread position:
               322-795
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               330
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               99, 137
               

               Conread position:
               325-934
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 43
               

               Conread position:
               336-562
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               336-932
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 134
               

               Conread position:
               339-536
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 21
               

               Conread position:
               339-543
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               79, 91
               

               Conread position:
               359-933
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 160
               

               Conread position:
               362-905
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 9
               

               Conread position:
               385-905
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 140
               

               Conread position:
               388-886
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 105
               

               Conread position:
               402-542
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               409-936
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 252
               

               Conread position:
               415-746
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               90, 152
               

               Conread position:
               418-711
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               151, 38
               

               Conread position:
               418-786
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 14
               

               Conread position:
               419-933
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               443-714
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               150, 222
               

               Conread position:
               447-936
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 76
               

               Conread position:
               451-681
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               65, 211
               

               Conread position:
               465-713
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               94, 58
               

               Conread position:
               468-934
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 47
               

               Conread position:
               491-793
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               7, 149
               

               Conread position:
               500-928
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 97
               

               Conread position:
               516-933
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 50
               

               Conread position:
               535-936
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 26
               

               Conread position:
               540-896
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               59, 26
               

               Conread position:
               542-919
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               285, 65
               

               Conread position:
               545-933
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               259
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               545-936
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               45, 81
               

               Conread position:
               546-934
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               285
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               57, 109
               

               Conread position:
               550-930
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               553-922
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 110
               

               Conread position:
               567-788
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               7, 87
               

               Conread position:
               568-932
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               569-919
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               39, 79
               

               Conread position:
               570-931
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 12
               

               Conread position:
               571-928
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               29, 82
               

               Conread position:
               573-904
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               591-919
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               593-919
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 65
               

               Conread position:
               597-934
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               243
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               230, 58
               

               Conread position:
               598-934
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               26, 49
               

               Conread position:
               601-934
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               603-781
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               610-931
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               64, 45
               

               Conread position:
               611-936
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 44
               

               Conread position:
               627-919
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               194, 30
               

               Conread position:
               636-936
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               230
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               139, 25
               

               Conread position:
               639-923
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               216
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               130, 18
               

               Conread position:
               648-936
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               7, 25
               

               Conread position:
               654-936
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               56, 19
               

               Conread position:
               655-932
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               133, 49
               

               Conread position:
               673-936
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               103, 31
               

               Conread position:
               705-933
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               71, 23
               

               Conread position:
               712-935
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               69, 25
               

               Conread position:
               720-929
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               720-936
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               77, 70
               

               Conread position:
               737-936
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               747-934
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               81, 36
               

               Conread position:
               776-930
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 35
               

               Conread position:
               779-932
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               50, 32
               

               Conread position:
               779-934
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               783-912
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               785-925
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               785-935
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               42, 26
               
Show alignments to all cow chromosomes.