Cow genome map
| Conread name: | Thy1-THY010036D02 |
| Conread position: | 335-484 |
| Cow position: | chr21:11332175-11332323 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 112, 34 |
| Conread position: | 354-465 |
| Cow position: | chr21:28873017-28873129 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 359-692 |
| Cow position: | chr21:47934718-47935038 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 211, 9 |
| Conread position: | 364-731 |
| Cow position: | chr21:2718089-2717733 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 79, 99 |
| Conread position: | 367-721 |
| Cow position: | chr21:3982827-3983172 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 256 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 369-673 |
| Cow position: | chr21:18821657-18821359 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 26, 109 |
| Conread position: | 369-724 |
| Cow position: | chr21:9890385-9890726 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 109 |
| Conread position: | 371-672 |
| Cow position: | chr21:33753393-33753687 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 114 |
| Conread position: | 371-731 |
| Cow position: | chr21:23808278-23808627 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 93 |
| Conread position: | 372-558 |
| Cow position: | chr21:2719534-2719358 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 89, 76 |
| Conread position: | 373-692 |
| Cow position: | chr21:12629378-12629077 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 195, 17 |
| Conread position: | 373-706 |
| Cow position: | chr21:13125301-13124978 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 93, 89 |
| Conread position: | 373-707 |
| Cow position: | chr21:2543273-2542953 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 149, 32 |
| Conread position: | 373-720 |
| Cow position: | chr21:38279962-38279622 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 195, 11 |
| Conread position: | 373-724 |
| Cow position: | chr21:2531459-2531124 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 91, 109 |
| Conread position: | 373-731 |
| Cow position: | chr21:3425169-3425514 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 248 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 197, 46 |
| Conread position: | 373-731 |
| Cow position: | chr21:3799737-3799382 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 197, 90 |
| Conread position: | 374-731 |
| Cow position: | chr21:29082731-29083077 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 196, 86 |
| Conread position: | 398-731 |
| Cow position: | chr21:18284038-18284358 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 176, 61 |
| Conread position: | 407-724 |
| Cow position: | chr21:4075545-4075852 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 55, 75 |
| Conread position: | 454-732 |
| Cow position: | chr21:28873084-28873357 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 493-705 |
| Cow position: | chr21:4074540-4074325 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 506-721 |
| Cow position: | chr21:2707913-2708119 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.